Abstract
In recent years the functions that the p53 tumor suppressor plays in human biology have been greatly extended beyond “guardian of the genome.” Our studies of promoter response element sequences targeted by the p53 master regulatory transcription factor suggest a general role for this DNA damage and stress-responsive regulator in the control of human Toll-like receptor (TLR) gene expression. The TLR gene family mediates innate immunity to a wide variety of pathogenic threats through recognition of conserved pathogen-associated molecular motifs. Using primary human immune cells, we have examined expression of the entire TLR gene family following exposure to anti-cancer agents that induce the p53 network. Expression of all TLR genes, TLR1 to TLR10, in blood lymphocytes and alveolar macrophages from healthy volunteers can be induced by DNA metabolic stressors. However, there is considerable inter-individual variability. Most of the TLR genes respond to p53 via canonical as well as noncanonical promoter binding sites. Importantly, the integration of the TLR gene family into the p53 network is unique to primates, a recurrent theme raised for other gene families in our previous studies. Furthermore, a polymorphism in a TLR8 response element provides the first human example of a p53 target sequence specifically responsible for endogenous gene induction. These findings—demonstrating that the human innate immune system, including downstream induction of cytokines, can be modulated by DNA metabolic stress—have many implications for health and disease, as well as for understanding the evolution of damage and p53 responsive networks.
Highlights
The p53 master regulator is responsive to a variety of DNA metabolic stresses resulting in induction or repression of over 200 genes as well as several LINC- and micro-RNAs [1,2]
We address p53 responsiveness in primary human lymphocytes and alveolar macrophages collected from healthy volunteers
We report a single nucleotide polymorphism (SNP) in a p53 response element (REs) within the TLR8 promoter that alters p53 responsiveness in primary human cells
Summary
The p53 master regulator is responsive to a variety of DNA metabolic stresses resulting in induction or repression of over 200 genes as well as several LINC- and micro-RNAs [1,2]. Using in vivo transactivation systems based in yeast and human cells as well as binding in human cell extracts [3,4], we recently found that functionality of the binding consensus RRRCWWGYYYnRRRCWWGYYY (R, pyrimidine; Y, pyrimidine; W, A or T; n, spacer of 0 to 13 bases) is greatest when there is at most a single base spacer and if ‘‘WW’’ is ‘‘AT.’’ we defined functionality for half-sites (RRRCWWGYYY) and found in cis synergy when another transcription factor, estrogen receptor, was bound nearby (for a description of noncanonical REs including half-sites see [3,5] and summary in [6]) Based on these functionality rules, we found that the evolution of p53 control of at least one gene family, DNA metabolism and repair, is limited to primates [7]. We identified single nucleotide polymorphisms in REs that are predicted to modify responsiveness of genes to p53 mediated stress [8]
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