Abstract

The SMC5/6 protein complex consists of the Smc5, Smc6 and Non-Smc-Element (Nse) proteins and is important for genome stability in many species. To identify novel components in the DNA repair pathway, we carried out a genetic screen to identify mutations that confer reduced resistance to the genotoxic effects of caffeine, which inhibits the ATM and ATR DNA damage response proteins. This approach identified inactivating mutations in CG5524 and MAGE, homologs of genes encoding Smc6 and Nse3 in yeasts. The fact that Smc5 mutants are also caffeine-sensitive and that Mage physically interacts with Drosophila homologs of Nse proteins suggests that the structure of the Smc5/6 complex is conserved in Drosophila. Although Smc5/6 proteins are required for viability in S. cerevisiae, they are not essential under normal circumstances in Drosophila. However, flies carrying mutations in Smc5, Smc6 and MAGE are hypersensitive to genotoxic agents such as ionizing radiation, camptothecin, hydroxyurea and MMS, consistent with the Smc5/6 complex serving a conserved role in genome stability. We also show that mutant flies are not compromised for pre-mitotic cell cycle checkpoint responses. Rather, caffeine-induced apoptosis in these mutants is exacerbated by inhibition of ATM or ATR checkpoint kinases but suppressed by Rad51 depletion, suggesting a functional interaction involving homologous DNA repair pathways that deserves further scrutiny. Our insights into the SMC5/6 complex provide new challenges for understanding the role of this enigmatic chromatin factor in multi-cellular organisms.

Highlights

  • The evolutionarily conserved Structural Maintenance of Chromosomes proteins are essential for the organization, segregation, and stability of the genome [1,2,3]

  • We sought to identify novel genes functioning in DNA damage response pathways that are redundant with ataxia telangiectasia mutated (ATM) and ATR, by screening for conditional eye phenotypes in adult flies that were fed caffeine throughout larval development

  • To identify novel genes functioning in DNA damage response pathways that are redundant with ATM and ATR, we previously performed a genetic screen to identify conditional eye phenotypes in adult flies fed 2 mM caffeine and 3 mM hydroxyurea (HU) throughout larval development [31]

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Summary

Introduction

The evolutionarily conserved Structural Maintenance of Chromosomes proteins are essential for the organization, segregation, and stability of the genome [1,2,3]. Cohesin holds sister chromatids together after DNA replication and plays important roles in regulation of gene expression and DNA repair [4], while condensin is essential for mitotic chromosome organization and segregation [5]. The Smc5/6 complex in the yeasts is made up of eight subunits that form three sub-complexes: Smc6-Smc5-Nse, Nse1-Nse3Nse, and Nse5-Nse6 [11]. A RING finger protein with E3 ubiquitin ligase activity, Nse, the kleisin component of the complex, and Nse, a MAGE homolog, interact with each other to form the sub-complex that bridges the head domain of the Smc5-Smc heterodimer [7,14,15,16,17]. Nse and Nse form the third sub-complex in yeasts, but these proteins have no counterparts in higher eukaryotes [11]

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