Abstract

Somatic embryogenesis (SE) is a powerful tool for plant genetic improvement when used in combination with traditional agricultural techniques, and it is also an important technique to understand the different processes that occur during the development of plant embryogenesis. SE onset depends on a complex network of interactions among plant growth regulators, mainly auxins and cytokinins, during the proembryogenic early stages, and ethylene and gibberellic and abscisic acids later in the development of the somatic embryos. These growth regulators control spatial and temporal regulation of multiple genes in order to initiate change in the genetic program of somatic cells, as well as moderating the transition between embryo developmental stages. In recent years, epigenetic mechanisms have emerged as critical factors during SE. Some early reports indicate that auxins and in vitro conditions modify the levels of DNA methylation in embryogenic cells. The changes in DNA methylation patterns are associated with the regulation of several genes involved in SE, such as WUS, BBM1, LEC, and several others. In this review, we highlight the more recent discoveries in the understanding of the role of epigenetic regulation of SE. In addition, we include a survey of different approaches to the study of SE, and new opportunities to focus SE studies.

Highlights

  • Somatic embryogenesis (SE) is a powerful tool for plant genetic improvement when it is used in combination with traditional agricultural techniques (Loyola-Vargas et al, 2008)

  • The bisulfite method has become the basis for other methods, such as methylation-sensitive single nucleotide primer extension (Ms-SNuPE), combined bisulfite restriction analysis (COBRA), methylation-specific PCR (MSP), and others that would be interesting to apply during the transition of somatic cells into embryogenic ones

  • Since the lowest level of DNA methylation is always found in the embryogenic cells (Palmgren et al, 1991), it is possible that DNA hypomethylation is involved in the signal that leads to the induction of SE

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Summary

The role of chromatin modifications in somatic embryogenesis in plants

SE onset depends on a complex network of interactions among plant growth regulators, mainly auxins and cytokinins, during the proembryogenic early stages, and ethylene and gibberellic and abscisic acids later in the development of the somatic embryos. These growth regulators control spatial and temporal regulation of multiple genes in order to initiate change in the genetic program of somatic cells, as well as moderating the transition between embryo developmental stages. We highlight the more recent discoveries in the understanding of the role of epigenetic regulation of SE.

Introduction
Substrate specificity
Techniques to Determine DNA Methylation
Analysis of DNA Methylation by Bisulfite Sequencing
In Situ Analysis of DNA Methylation
Epigenetics of Somatic Embryogenesis
Poaceae Rosaceae Rubiaceae
Epigenetic Changes During the Development of Somatic Embryos
Epigenetic Changes in Regenerated Plants
Findings
Conclusion
Full Text
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