Abstract

Pseudogenes have been considered as non-functional transcriptional relics of human genomic for long time. However, recent studies revealed that they play a plethora of roles in diverse physiological and pathological processes, especially in cancer, and many pseudogenes are transcribed into long noncoding RNAs and emerging as a novel class of lncRNAs. However, the biological roles and underlying mechanism of pseudogenes in the pathogenesis of non small cell lung cancer are still incompletely elucidated. This study identifies a putative oncogenic pseudogene DUXAP10 in NSCLC, which is located in 14q11.2 and 2398 nt in length. Firstly, we found that DUXAP10 was significantly up-regulated in 93 human NSCLC tissues and cell lines, and increased DUXAP10 was associated with patients poorer prognosis and short survival time. Furthermore, the loss and gain of functional studies including growth curves, migration, invasion assays and in vivo studies verify the oncogenic roles of DUXAP10 in NSCLC. Finally, the mechanistic experiments indicate that DUXAP10 could interact with Histone demethylase Lysine specific demethylase1 (LSD1) and repress tumor suppressors Large tumor suppressor 2 (LATS2) and Ras-related associated with diabetes (RRAD) transcription in NSCLC cells. Taken together, these findings demonstrate DUXAP10 exerts the oncogenic roles through binding with LSD1 and epigenetic silencing LATS2 and RRAD expression. Our investigation reveals the novel roles of pseudogene in NSCLC, which may serve as new target for NSCLC diagnosis and therapy.

Highlights

  • Lung cancer morbidity and mortality increased year by year

  • We analyzed the profiles of Non-small cell lung cancer (NSCLC) patient from Gene Expression Omnibus (GEO), and found that DUXAP10 was up-regulated in NSCLC tissues compared with normal lung tissues (Figure 1A and 1B)

  • The results showed that DUXAP10 was up-regulated in 81/93 (Figure 1C)

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Summary

Introduction

Lung cancer morbidity and mortality increased year by year. Non-small cell lung cancer (NSCLC) accounts for 80% of all lung cancers and can be divided into squamous cell carcinoma, adenocarcinoma, and large cell carcinoma, etc [1]. In 2012, Shanker and his colleagues identified 2082 pseudogene transcripts based on next-generation sequencing data of 293 samples, among which 154 are highly tissue-specific and 218 expressed only in cancer samples [9, 10]. This study showed that many pseudogene transcripts are tissue and/or cancerspecific, and systematically revealed the potential of pseudogenes as prognostic and subtype biomarkers in cancers [11]. These findings indicating that aberrant pseudogenes may contribute to tumorigenesis, their potential biological function and underlying mechanisms still remain elusive

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