Abstract

Somatic non-synonymous mutations in the DNA of tumor cells may result in the presentation of tumor-specific peptides to T cells. The recognition of these so-called neoepitopes now has been firmly linked to the clinical success of checkpoint blockade and adoptive T cell therapy. Following proof-of-principle studies in preclinical models there was a surge of strategies to identify and exploit genetically defined clonally expressed neoepitopes. These approaches assume that neoepitope availability remains stable during tumor progression but tumor genetics has taught us otherwise. Under the pressure of the immune system, neoepitope expression dynamically evolves rendering neoepitope specific T cells ineffective. This implies that the immunotherapeutic strategy applied should be flexible in order to cope with these changes and/or aiming at a broad range of epitopes to prevent the development of escape variants. Here, we will address the heterogeneous and dynamic expression of neoepitopes and describe our perspective and demonstrate possibilities how to further exploit the clinical potential of the neoepitope repertoire.

Highlights

  • Spectacular progress has been made in the treatment of cancer by the introduction of checkpoint blocking antibodies against the inhibitory molecules CTLA-4, and PD-1 or its ligand PD-L1 [1, 2]

  • Shared tumor antigens are important targets for development of immunotherapy this review focuses exclusively on the exploitation of neoepitopes

  • We showed that synthetic long peptides (SLPs)-stimulated T cells respond to neoepitope peptide-pulsed APC and recognized autologous tumor cells, indicating that they recognize endogenously naturally presented neoepitopes (Figure 2C) and as such have clinical potential

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Summary

Frontiers in Immunology

Somatic non-synonymous mutations in the DNA of tumor cells may result in the presentation of tumor-specific peptides to T cells The recognition of these so-called neoepitopes has been firmly linked to the clinical success of checkpoint blockade and adoptive T cell therapy. Following proof-of-principle studies in preclinical models there was a surge of strategies to identify and exploit genetically defined clonally expressed neoepitopes. These approaches assume that neoepitope availability remains stable during tumor progression but tumor genetics has taught us otherwise. Under the pressure of the immune system, neoepitope expression dynamically evolves rendering neoepitope specific T cells ineffective This implies that the immunotherapeutic strategy applied should be flexible in order to cope with these changes and/or aiming at a broad range of epitopes to prevent the development of escape variants.

INTRODUCTION
Neoepitopes As Targets for Personalized Immunotherapy
HETEROGENEITY AND DYNAMICS OF NEOEPITOPE LANDSCAPE
EXPLOITING THE POTENTIAL OF THE VAST NUMBER OF PUTATIVE NEOEPITOPES
WITH NEOEPITOPE SPECIFIC T CELLS
Findings
TO EXPLOIT THE CLINICAL POTENTIAL OF THE NEOEPITOPE REPERTOIRE
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