Abstract

A major bottleneck in structural, biochemical and biophysical studies of proteins is the need for large amounts of pure homogenous material, which is generally obtained by recombinant overexpression. Here we introduce a vector collection, the pCri System, for cytoplasmic and periplasmic/extracellular expression of heterologous proteins that allows the simultaneous assessment of prokaryotic and eukaryotic host cells (Escherichia coli, Bacillus subtilis, and Pichia pastoris). By using a single polymerase chain reaction product, genes of interest can be directionally cloned in all vectors within four different rare restriction sites at the 5′end and multiple cloning sites at the 3′end. In this way, a number of different fusion tags but also signal peptides can be incorporated at the N- and C-terminus of proteins, facilitating their expression, solubility and subsequent detection and purification. Fusion tags can be efficiently removed by treatment with site-specific peptidases, such as tobacco etch virus proteinase, thrombin, or sentrin specific peptidase 1, which leave only a few extra residues at the N-terminus of the protein. The combination of different expression systems in concert with the cloning approach in vectors that can fuse various tags makes the pCri System a valuable tool for high throughput studies.

Highlights

  • Researchers performing biochemical, biophysical and biological studies on proteins commonly require large amounts of pure homogeneous material, which cannot usually be purified from natural sources

  • Description of the pCri System We generated a collection of vectors for recombinant protein overexpression in two bacterial (E. coli and B. subtilis) and one eukaryotic (P. pastoris) host strains

  • Most of the E. coli vectors are pET based [61] with the exception of pCri-12, which is based on pTrc99a [50]

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Summary

Introduction

Researchers performing biochemical, biophysical and biological studies on proteins commonly require large amounts of pure homogeneous material, which cannot usually be purified from natural sources. Proteins are over-expressed heterologously in various systems incorporating host cells of bacterial, yeast, insect, or mammalian origin [1,2,3]. Nlm.nih.gov), UniProt (http://www.uniprot.org) and PDB (http:// www.pdb.org) for known homologous proteins may identify possible problems and appropriate solutions for subsequent experiments. It is advisable to test protein orthologs of different origin, including distantly related or unrelated species (bacteria, archaea, and eukaryotes). At this point, analysis of the primary and secondary structure of both the encoding mRNA and the translated polypeptide may anticipate downstream problems

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