Abstract

NUTCRACKER (NUC) is a transcription factor expressed in multiple tissues, but little is known about its physiological roles. In this study, we explored the physiological function of NUC with the Arabidopsis knockout, rescue, and overexpression lines. We found that NUC overexpression promoted development at the germination, seedling, and juvenile stages. NUC overexpression increased resistance to nitrogen (N) deficiency stress by increasing the chlorophyll content, suppressing anthocyanin accumulation, and increasing the biomass under N deficiency. In contrast, the absence of NUC did not affect such characteristics. N deficiency significantly increased the expression of NUC in leaves but did not affect the expression of NUC in roots. The overexpression of NUC promoted primary root length under both normal and N deficiency conditions. Furthermore, we found that the N-responsive and lateral-root-related genes TGA1 and NRT2.4 had NUC-binding sites in their promoter regions and that their expression was upregulated by NUC under N deficiency. The overexpression of the NUC increased the number and length of the lateral roots under N deficiency through inducible promotion. Multiple lines of investigation suggest that the regulatory function of the NUC could be bypassed through its redundant MAGPIE (MGP) when the NUC is absent. Our findings provide novel insight into NUC’s functions and will assist efforts to improve plants’ development and resistance to nutrient stresses.

Highlights

  • NUTCRACKER (NUC/IDD8, AT5G44160), which belongs to the INDETERMINATEDOMAIN (IDD) family, is a Cys2His2 zinc-finger domain (C2H2) transcription factor

  • During the juvenile stage, we found that a loss of NUC did not affect the plants’ growth, while the overexpression of NUC resulted in the accumulation of a 1.79-fold higher whole-plant biomass and 1.49-fold higher root biomass over that of Col (Figure 1d,e)

  • We examined the expression of these 6 genes in the roots of the Col, nuc1-1, OE-1, and ProNUC::NUC lines and found that TGA1 and NRT2.4 were upregulated by NUC under N deficiency (Figures S2 and 5a,b)

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Summary

Introduction

NUTCRACKER (NUC/IDD8, AT5G44160), which belongs to the INDETERMINATEDOMAIN (IDD) family, is a Cys2His zinc-finger domain (C2H2) transcription factor. NUTCRACKER (NUC/IDD8, AT5G44160), which belongs to the INDETERMINATE. NUC is expressed in many plant tissues but is especially common in vegetative tissues [1]. In. Arabidopsis, NUC participates in sugar metabolism, affecting the expression of sucrose transporter genes and sucrose synthase genes and contributing to flowering time [1]. With its homologous proteins JACKDAW (JKD) and MAGPIE (MGP), NUC was previously described as a direct SCARECROW (SCR) and SHORT ROOT (SHR) transcriptional target, and it regulates periclinal divisions in ground tissues [3,4]. We previously found that it can regulate root tip development in A. thaliana [5]. To the best of our knowledge, only two cases of its physiological roles, positively regulating flowering and root development, have been reported far.

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