Abstract

MoxR ATPases are widespread throughout bacteria and archaea. The experimental evidence to date suggests that these proteins have chaperone-like roles in facilitating the maturation of dedicated protein complexes that are functionally diverse. In Escherichia coli, the MoxR ATPase RavA and its putative cofactor ViaA are found to exist in early stationary-phase cells at 37°C at low levels of about 350 and 90 molecules per cell, respectively. Both proteins are predominantly localized to the cytoplasm, but ViaA was also unexpectedly found to localize to the cell membrane. Whole genome microarrays and synthetic lethality studies both indicated that RavA-ViaA are genetically linked to Fe-S cluster assembly and specific respiratory pathways. Systematic analysis of mutant strains of ravA and viaA indicated that RavA-ViaA sensitizes cells to sublethal concentrations of aminoglycosides. Furthermore, this effect was dependent on RavA's ATPase activity, and on the presence of specific subunits of NADH:ubiquinone oxidoreductase I (Nuo Complex, or Complex I). Importantly, both RavA and ViaA were found to physically interact with specific Nuo subunits. We propose that RavA-ViaA facilitate the maturation of the Nuo complex.

Highlights

  • The MoxR family of AAA+ ATPases is widespread across different bacterial and archaeal species [1,2]

  • Expression and localization of RavA and ViaA In an effort to assess the function of RavA and ViaA in E. coli, we first investigated the expression and localization profiles of the two proteins

  • We estimated that approximately 350 molecules of RavA and 90 molecules of ViaA are present per cell at optimum (Fig. 1A)

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Summary

Introduction

The MoxR family of AAA+ ATPases is widespread across different bacterial and archaeal species [1,2]. Based on sequence similarity and local genetic structure, MoxR proteins are subdivided into seven subfamilies: MRP (MoxR Proper), APE0892, RavA, CGN (CbbQ/GvpN/NorQ), APE2220, PA2707, and YehL [1]. MoxR of the MRP subfamily in Paracoccus denitrificans and Methylobacterium extorquens is important for the activation of methanol dehydrogenase (MDH) [3,4]. NirQ/NorQ, which belong to the CGN subfamily, are necessary for the activity of nitric oxide reductase in Pseudomonas stutzeri [5], Pseudomonas aeruginosa [6], Paracoccus denitrificans [7], and Rhodobacter sphaeroides 2.4.3 [8]. In the chemolithoautotrophic eubacterium Oligotropha carboxidovorans OM5, CoxD, a member of the APE2220 subfamily, is required for the assembly of the [CuSMoO2] cluster in the carbon-monoxide (CO) dehydrogenase, which enables the bacteria to utilize CO as a sole carbon source [9]

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