Abstract

Recent studies have identified the critical role of microbiota in the pathophysiology of autoimmune liver diseases (AILDs), including autoimmune hepatitis (AIH), primary biliary cholangitis (PBC), and primary sclerosing cholangitis (PSC). Metagenomic studies reveal significant decrease of gut bacterial diversity in AILDs. Although profiles of metagenomic vary widely, Veillonella is commonly enriched in AIH, PBC, and PSC. Apart from gut microbiome, the oral and bile microbiome seem to be associated with these diseases as well. The functional analysis of metagenomics suggests that metabolic pathways changed in the gut microbiome of the patients. Microbial metabolites, including short-chain fatty acids (SCFAs) and microbial bile acid metabolites, have been shown to modulate innate immunity, adaptive immunity, and inflammation. Taken together, the evidence of host–microbiome interactions and in-depth mechanistic studies needs further accumulation, which will offer more possibilities to clarify the mechanisms of AILDs and provide potential molecular targets for the prevention and treatment in the future.

Highlights

  • Autoimmune liver diseases (AILDs) are chronic inflammatory conditions of the liver, including autoimmune hepatitis (AIH), primary biliary cholangitis (PBC), and primary sclerosing cholangitis (PSC) (Biewenga et al, 2020)

  • Firmicutes and Proteobacteria were increased in both AIH and PBC, while Bacteroidetes showed no significant difference in AIH and PBC when compared to healthy control (HC) (Lv et al, 2020)

  • The abundance of Proteobacteria was higher when compared with patients from the control group (Tyc et al, 2020). These findings suggest that both gut and oral microbiome may be involved in autoimmune liver diseases (AILDs) pathogenesis

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Summary

INTRODUCTION

Autoimmune liver diseases (AILDs) are chronic inflammatory conditions of the liver, including autoimmune hepatitis (AIH), primary biliary cholangitis (PBC), and primary sclerosing cholangitis (PSC) (Biewenga et al, 2020). Imbalanced microbial communities have been suggested to be related with aberrant immune response (Shi et al, 2017). Relationships have been established between the microbiome and autoimmune diseases, such as systemic lupus erythematosus (Katz-Agranov and Zandman-Goddard, 2017), inflammatory bowel disease (Franzosa et al, 2019), and rheumatoid arthritis (Bergot et al, 2019). Intestinal microbiome and liver could communicate through the biliary tract, portal vein, and systemic circulation, given the special anatomic and physiological relationships of liver and gut. Studies have discovered that liver diseases are intimately linked to the microbial communities of the human gut (Seki and Schnabl, 2012; Miyake and Yamamoto, 2013; LaRusso et al, 2017). Various metabolites of gut microbiome have been shown to participate in immune development and regulation (Levy et al, 2017)

Microbiome in Autoimmune Liver Diseases
The Microbiome in Autoimmune Liver Diseases
AIH PBC PSC
Stool Stool Saliva
Stool Stool Stool Stool saliva
Stool Bile Bile Saliva
Functional Analyses of the Microbiome in Autoimmune Liver Diseases
Microbial Metabolites Associated With Autoimmune Liver Diseases
THE ROLE OF MICROBIOME IN THE PATHOGENESIS OF AUTOIMMUNE LIVER DISEASES
CONCLUSION
Findings
AUTHOR CONTRIBUTIONS
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