Abstract

BackgroundMounting evidence demonstrates that long noncoding RNAs (lncRNAs) have critical roles during the initiation and progression of cancers. In this study, we report that the small nucleolar RNA host gene 1 (SNHG1) is involved in colorectal cancer progression.MethodsWe analyzed RNA sequencing data to explore abnormally expressed lncRNAs in colorectal cancer. The effects of SNHG1 on colorectal cancer were investigated through in vitro and in vivo assays (i.e., CCK-8 assay, colony formation assay, flow cytometry assay, EdU assay, xenograft model, immunohistochemistry, and western blot). The mechanism of SNHG1 action was explored through bioinformatics, RNA fluorescence in situ hybridization, luciferase reporter assay, RNA pull-down assay, chromatin immunoprecipitation assay and RNA immunoprecipitation assay.ResultsOur analysis revealed that SNHG1 was upregulated in human colorectal cancer tissues, and high SNHG1 expression was associated with reduced patient survival. We also found that high SNHG1 expression was partly induced by SP1. Moreover, SNHG1 knockdown significantly repressed colorectal cancer cells growth both in vitro and in vivo. Mechanistic investigations demonstrated that SNHG1 could directly interact with Polycomb Repressive Complex 2 (PRC2) and modulate the histone methylation of promoter of Kruppel like factor 2 (KLF2) and Cyclin dependent kinase inhibitor 2B (CDKN2B) in the nucleus. In the cytoplasm, SNHG1 acted as a sponge for miR-154-5p, reducing its ability to repress Cyclin D2 (CCND2) expression.ConclusionsTaken together, the results of our studies illuminate how SNHG1 formed a regulatory network to confer an oncogenic function in colorectal cancer and suggest that SNHG1 may serve as a potential target for colorectal cancer diagnosis and treatment.

Highlights

  • Mounting evidence demonstrates that long noncoding RNAs have critical roles during the initiation and progression of cancers

  • small nucleolar RNA host gene 1 (SNHG1) is up-regulated in human colorectal cancer In this study, we first analyzed RNA sequencing data of colorectal cancer and para-cancerous tissues downloaded from The Cancer Genome Atlas (TCGA) [15]

  • Among these differentially expressed long noncoding RNAs (lncRNAs), we focused on SNHG1 given its abundance is relatively high

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Summary

Introduction

Mounting evidence demonstrates that long noncoding RNAs (lncRNAs) have critical roles during the initiation and progression of cancers. We report that the small nucleolar RNA host gene 1 (SNHG1) is involved in colorectal cancer progression. Advances in whole-genome sequencing technology revealed that greater than 90 % of the human genome is actively transcribed. Only 2 % of the transcripts encode proteins, and most transcripts are non-coding RNAs (ncRNAs) [4] Among those non-coding transcripts, lncRNAs have attracted increasing attention. LncRNA is a type of noncoding RNAs that is greater than 200 nucleotides in length. Many studies revealed that lncRNAs could be vital regulators in numerous biological processes, such as cell cycle control, cell differentiation, X chromosome inactivation, mRNA alternative

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