Abstract

Disulfide bonds play a crucial role in proteins, modulating their stability and constraining their conformational dynamics. A particularly important case is that of proteins that need to withstand forces arising from their normal biological function and that are often disulfide bonded. However, the influence of disulfides on the overall mechanical stability of proteins is poorly understood. Here, we used single-molecule force spectroscopy (smFS) to study the role of disulfide bonds in different mechanical proteins in terms of their unfolding forces. For this purpose, we chose the pilus protein FimG from Gram-negative bacteria and a disulfide-bonded variant of the I91 human cardiac titin polyprotein. Our results show that disulfide bonds can alter the mechanical stability of proteins in different ways depending on the properties of the system. Specifically, disulfide-bonded FimG undergoes a 30% increase in its mechanical stability compared with its reduced counterpart, whereas the unfolding force of I91 domains experiences a decrease of 15% relative to the WT form. Using a coarse-grained simulation model, we rationalized that the increase in mechanical stability of FimG is due to a shift in the mechanical unfolding pathway. The simple topology-based explanation suggests a neutral effect in the case of titin. In summary, our results indicate that disulfide bonds in proteins act in a context-dependent manner rather than simply as mechanical lockers, underscoring the importance of considering disulfide bonds both computationally and experimentally when studying the mechanical properties of proteins.

Highlights

  • Disulfide bonds play a crucial role in proteins, modulating their stability and constraining their conformational dynamics

  • Unfolding forces remain largely unchanged upon disulfide bonding, as expected for a structure-based model where the force-bearing region of the protein remains uncompromised by the presence of the disulfide bond. These results suggest that disulfide bonds in proteins act in a context-dependent manner rather than as mechanical lockers

  • In the case of titin we find that there is a modest reduction of the mechanical stability of the protein, which may be too subtle for a simple structure-based simulation model to capture

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Summary

Edited by Norma Allewell

Disulfide bonds play a crucial role in proteins, modulating their stability and constraining their conformational dynamics. We used single-molecule force spectroscopy (smFS) to study the role of disulfide bonds in different mechanical proteins in terms of their unfolding forces. For this purpose, we chose the pilus protein FimG from Gram-negative bacteria and a disulfide-bonded variant of the I91 human cardiac titin polyprotein. Our second example is a mutant of the I91 (formerly termed I27) human cardiac titin polyprotein (I91G32C/A75C), which has its engineered Cys residues far in sequence, but close enough in structure to spontaneously form disulfide bonds [9] We measure their mechanical properties using single-molecule force spectroscopy (smFS) in the constant speed mode (24 –27) using reducing and oxidative

Influence of disulfide bonds on mechanical stability
Constant speed pulling experiments
Disulfide bonds increase the mechanical stability of FimG
Discussion
Protein expression and purification
Molecular simulations
Analysis of the simulations
Full Text
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