Abstract

Genome instability is a characteristic enabling factor for carcinogenesis. HelQ helicase is a component of human DNA maintenance systems that prevent or reverse genome instability arising during DNA replication. Here, we provide details of the molecular mechanisms that underpin HelQ function—its recruitment onto ssDNA through interaction with replication protein A (RPA), and subsequent translocation of HelQ along ssDNA. We describe for the first time a functional role for the non-catalytic N-terminal region of HelQ, by identifying and characterizing its PWI-like domain. We present evidence that this domain of HelQ mediates interaction with RPA that orchestrates loading of the helicase domains onto ssDNA. Once HelQ is loaded onto the ssDNA, ATP-Mg2+ binding in the catalytic site activates the helicase core and triggers translocation along ssDNA as a dimer. Furthermore, we identify HelQ-ssDNA interactions that are critical for the translocation mechanism. Our data are novel and detailed insights into the mechanisms of HelQ function relevant for understanding how human cells avoid genome instability provoking cancers, and also how cells can gain resistance to treatments that rely on DNA crosslinking agents.

Highlights

  • The Ski2-like family of RNA and DNA helicases includes the HelQ DNA repair helicase [1]

  • HelQ helicase is part of systems in human cells that guard against genetic changes that accumulate as part of carcinogenesis

  • In this study we identify that the human HelQ protein comprises a noncatalytic N-terminal region (N-HelQ) for ssDNA loading via replication protein A (RPA), and a fully active ‘core’ helicase (C-HelQ) that hydrolyses ATP and translocates ssDNA without need for NHelQ

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Summary

Introduction

The Ski2-like family of RNA and DNA helicases includes the HelQ DNA repair helicase [1]. Deletion of the helq gene ( helq) causes genome instability, an enabling factor triggering cancers [2]. Similar genetic combinations in worms indicated that helq is epistatic with fcd-2, encoding FancD2 [6] and that helq is epistatic with jmjd-5 that encodes a histone-modifying enzyme [13]. These genetic problems associated with helq highlight the role of HelQ helicase as one of the ‘caretakers of the genome’, defects in which pre-dispose cells to becoming cancerous [14,15]. GWAS (Genome-Wide Association Studies) have identified helq polymorphisms and suscepti-

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