The Global mRNA Expression Profiles of Inhibiting PHGDH Induced Cisplatin Resistance in Gastric Cancer.

Abstract

Objective Drug resistance is the main hindrance to improve the prognosis of patients with gastric cancer. Amino acid metabolic reprograming is essential to satisfy the different requirements of cancer cells during drug resistance, of which serine deprivation could promote resistance to cisplatin in gastric cancer. As the key enzyme in the de novo biosynthesis of serine, phosphoglycerate dehydrogenase (PHGDH) inhibition could also induce cisplatin resistance in gastric cancer. This study aims to reveal the potential mechanisms of drug resistance induced by PHGDH inhibition via exploring the global mRNA expression profiles. Materials and Methods In this experimental study, the viability and the apoptotic rate of gastric cancer cells were evaluated by using Cell Counting Kit-8 (CCK-8) analysis and flow cytometric determination, respectively. The identification of differentially expressed genes (DEGs) was tested by mRNA-sequencing (mRNA-Seq) analysis. The confirmation of sequencing results was verified using real-time quantitative reverse transcription polymerase chain reaction (RT-qPCR). Results The inhibition of PHGDH significantly increased the viability and decreased the apoptotic rate induced by cisplatin in gastric cancer cells. mRNA-Seq analysis revealed that the combined treatment of NCT503 reduced the number of DEGs induced by cisplatin. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) showed that unfolded protein response, ECM receptor interaction and cell cycle signaling pathways were modulated by NCT503 treatment. Hub genes were identified by using protein-protein interaction network modeling, of which E1A binding protein p300 (EP300) and heat shock protein family A (Hsp70) member 8 (HSPA8) act as the vital genes in cisplatin resistance induced by the inhibition of PHGDH. ConclusionThese findings suggested that the inhibition of PHGDH promoted cisplatin resistance in gastric cancer through various intercellular mechanisms. And appropriate serine supplementation or the modulation of EP300 and HSPA8 may be of great help in overcoming cisplatin resistance in gastric cancer.