Abstract

Mayflies of the family Neoephemeridae are widespread in the Holarctic and Oriental regions, and its phylogenetic position is still unstable in the group Furcatergalia (mayflies with fringed gills). In the present study, we determined the complete mitogenomes of two species, namely Potamanthellus edmundsi and Pulchephemera projecta, of this family. The lengths of two mitogenomes were 15,274 bp and 16,031 bp with an A + T content of 73.38% and 73.07%, respectively. Two neoephemerid mitogenomes had a similar gene size, base composition, and codon usage of protein-coding genes (PCGs), and the sequenced gene arrangements were consistent with the putative ancestral insect mitogenomes as understood today. The most variable gene of Furcatergalia mitogenomes was ND2, while the most conserved gene was COI. Meanwhile, the analysis of selection pressures showed that ND6 and ATP8 exhibited a relaxed purifying selection, and COI was under the strongest purifying selection. Phylogenetic trees reconstructed based on two concatenated nucleotide datasets using both maximum likelihood (ML) and Bayesian inference (BI) estimations yielded robust identical topologies. These results corroborated the monophyly of seven studied families and supported the family Leptophlebiidae as being of the basal lineage of Furcatergalia. Additionally, the sister-group relationship of Caenidae and Neoephemeridae was well supported. Methodologically, our present study provides a general reference for future phylogenetic studies of Ephemeroptera at the mitogenome level.

Highlights

  • The mitochondrion is an important organelle in metazoan cells as it is mainly involved in life cycle, apoptosis, and metabolism [1]

  • The mitogenomes of both neoephemerid species encoded a complete set of 37 genes (13 protein-coding genes (PCGs), two ribosomalRNA genes (rRNAs) genes and 22 transfer RNA genes (tRNAs) genes, and a control region (CR; Figure 2 and Table 1)

  • Two neoephemerid mitogenomes generated in this study had a similar AT nucleotide bias, AT and GC-skews, and a codon usage of PCGs, and were comparable overall to other sequenced Furcatergalia mayflies

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Summary

Introduction

The mitochondrion is an important organelle in metazoan cells as it is mainly involved in life cycle, apoptosis, and metabolism [1]. The mitochondrial genome (mitogenome) contains a small double-stranded circular molecule of 14–20 kb in size and has a relatively stable organization and structure [2] It generally encodes 37 genes including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal. Comprehensive understanding of the evolutionary and phylogenetic relationships within Ephemeroptera is one of the most archaic of extant winged insects, origiEphemeroptera at the(mayflies) mitogenome level. Kluge hypothesis that two families (Caenidae and were grouped together grouped together with the burrowing mayflies (Figure 1C). Furcatergalia species concerning genomic structure, nucleotide composition, and the secondary structure of tRNAs. In addition, we incorporated the new mitogenome sequences into the Furcatergalia dataset to obtain a more reliable and robust phylogeny to understand the phylogenetic relationships within Furcatergalia

Features of the Sequenced Mitogenomes
Mitochondrial
Nucleotide Composition
Protein-Coding Genes
Ribosomal and Transfer RNA Genes
Non-Coding Regions
Comparative Analysis of Furcatergalia Mitogenomes
Phylogenetic Analysis
Phylogenetic
Whole-Genome Sequencing and Mitogenome Assembly
Mitogenome Annotation and Bioinformatic Analysis
Conclusions
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