The Fc Receptor Gene Asterias Rubens: Bioinformatic Data

Michel Leclerc

doi:10.54289/jvvd2200105

Abstract

In the present report, Asterias rubens Fc DNA Sequence was analysed from its transcriptome in bioinformatics; Identities occurred with other sea stars such as Patiria miniata and specially with mammals’ proteins. Identities with Fc receptor mammal IGE was found.

Highlights

Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions
Various vertebrate type 1 transmembrane proteins including macrophage mannose receptor, endo180, phospholipase A2 receptor, and dendritic and epithelial cell receptor (DEC205) have extracellular domains containing 8 or more CTLDs; these CTLDs remain in the parent model
A similar conformation is seen in the macrophage mannose receptor CRD4's putative non-sugar bound form of the domain in the acid environment of the endosome

Summary

Introduction

The aim of this work is to analyse Fc DNA sequence which was discovered in 2016 [1] from Starting material (dna) sequence in 5’-3’: TCCATTAGGGCAATGAGTGGGACTGCGCGGCTTGG CACAGATCATCCCTTTTCTATCACGACACCTCGAGT CTTTCCACTTGCCGTTGCTAATCTGTAATGCCACAC AGTTATTCTCCAATGATTCGACTCCAGACAGCTCAG TTTGCTCTTCTTCGATGAAGTTCGTGTAGTTGACGG GGGAATCGTTTGACCATTTCCAATCGCTTTCGTTGT GTGTATCATGGAGCCCGATCCACACGTCCCTGTCA ATTAGGTCGGTAAGAAAATCATTAATTTCTTGGTCA GTGATGGCGACCAGCCTAGCGCCGTCGTATTTAGT GCACTTCTGTTCAGCATCGACCCAGCGTGCTACATC GTCTGGAATCCAGAAGCATTCATCACGGAAGAGAT GGCCGTTGTTTAGGCAGTACTGTGGTTGACCAC GTACTGTTTGAAGAAGATGAGCTGACCCAATAACC ATCATCATCACGAATGGAATCATTGTGAATTTGTTT GAGATACGTCCGATACGTCCGTCCGTAGATGAAAA AACTGCCGAAGTCTCTCACATAATTCCACCAGGCA TTGTTGATGCCTTGCTGCTCTATGGTTGATGCTTGG TGGCAGTCCACGAAAGAATGTGCAGTTAGGGAAAG TCCAGCTTGTATATCTC Bioinformatics data were performed according MarchlerBauer et al [2,3,4]. Optimization: we used highly similar sequences (mega blast) We recall that molecule type was dna; the query length of 654 2 sequences were selected as shown in the table1: significant aligments were found. Predicted: Asterias rubens macrophage Asterias rubens 1197 1197 100% 0.0 mannose receptor 1 like (LOC117293835) mRNA BlastX original sequence: The query length is 654in this DNA molecule: non-redundant protein sequences were used as Database (nr).

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Results

Conclusion