Abstract

Perturbations during the cell DNA-Damage Response (DDR) can originate from alteration in the functionality of the microRNA-mediated gene regulation, being microRNAs (miRNAs), small non-coding RNAs that act as post-transcriptional regulators of gene expression. The oncogenic miR-27a is over-expressed in several tumors and, in the present study, we investigated its interaction with ATM, the gene coding for the main kinase of DDR pathway. Experimental validation to confirm miR-27a as a direct regulator of ATM was performed by site-direct mutagenesis of the luciferase reporter vector containing the 3′UTR of ATM gene, and by miRNA oligonucleotide mimics. We then explored the functional miR-27a/ATM interaction under biological conditions, i.e., during the response of A549 cells to ionizing radiation (IR) exposure. To evaluate if miR-27a over-expression affects IR-induced DDR activation in A549 cells we determined cell survival, cell cycle progression and DNA double-strand break (DSB) repair. Our results show that up-regulation of miR-27a promotes cell proliferation of non-irradiated and irradiated cells. Moreover, increased expression of endogenous mature miR-27a in A549 cells affects DBS rejoining kinetics early after irradiation.

Highlights

  • To maintain the integrity of genome, eukaryotic cells rely on a highly regulated system pathway of response to DNA damage—the DNA-Damage Response (DDR)—which encompasses damage sensors, mediators, signal transducers and effectors

  • We recently demonstrated that miR-27a and ATM are differentially expressed and anti-correlated in γ-irradiated human lymphocytes incubated in microgravity and that miR-27a could interact with ATM-3'-untranslated region (3'untranslated region (UTR)) [14]

  • We examined the role of miR-27a during the DNA-Damage Response (DDR)

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Summary

Introduction

To maintain the integrity of genome, eukaryotic cells rely on a highly regulated system pathway of response to DNA damage—the DNA-Damage Response (DDR)—which encompasses damage sensors, mediators, signal transducers and effectors. DDR pathway is post-transcriptionally regulated through selective mRNA stabilization or decay and regulation of translation [3] In this context, non-coding RNAs, such as microRNAs (miRNAs), have emerged as important regulators of gene expression of key components of DDR pathway. MiRNAs are natural single-stranded, small RNA molecules (18–22 nt) that regulate gene expression by binding to target mRNAs and suppress their translation or promote their cleavage [4]. Accumulating evidences have shown that miRNAs are altered following genotoxic and cytotoxic stress, and several studies suggested that miRNA expression is regulated in DDR at the transcriptional level, in a p53-dependent manner [11] and through modulation of miRNAs’ processing and maturation steps [12]. We analyzed the biological effects of miR-27a over-expression on the DNA damage response to γ-rays in A549 cells by using miRNA mimics which are chemically synthesized double stranded RNAs that, when introduced into cells, efficiently mimic specific endogenous miRNAs

Results and Discussion
Effects of miR-27a on Proliferation of A549 Cells
Effects of miR-27a Up-Regulation on Radiosensitivity of A549 Cells
Cell Culture
Construction of Recombinant Vectors and Site-Directed Mutagenesis
Transient Transfection and Cell Irradiation
Total RNA Isolation and qRT-PCR
Luciferase Reporter Assays
Clonogenic Survival Assay
Cell Cycle Analysis
Immunofluorescence Staining
Conclusions
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