Abstract

Vitamin K epoxide reductases (VKORs) constitute a major family of integral membrane thiol oxidoreductases. In humans, VKOR sustains blood coagulation and bone mineralization through the vitamin K cycle. Previous chemical models assumed that the catalysis of human VKOR (hVKOR) starts from a fully reduced active site. This state, however, constitutes only a minor cellular fraction (5.6%). Thus, the mechanism whereby hVKOR catalysis is carried out in the cellular environment remains largely unknown. Here we use quantitative mass spectrometry (MS) and electrophoretic mobility analyses to show that KO likely forms a covalent complex with a cysteine mutant mimicking hVKOR in a partially oxidized state. Trapping of this potential reaction intermediate suggests that the partially oxidized state is catalytically active in cells. To investigate this activity, we analyze the correlation between the cellular activity and the cellular cysteine status of hVKOR. We find that the partially oxidized hVKOR has considerably lower activity than hVKOR with a fully reduced active site. Although there are more partially oxidized hVKOR than fully reduced hVKOR in cells, these two reactive states contribute about equally to the overall hVKOR activity, and hVKOR catalysis can initiate from either of these states. Overall, the combination of MS quantification and biochemical analyses reveals the catalytic mechanism of this integral membrane enzyme in a cellular environment. Furthermore, these results implicate how hVKOR is inhibited by warfarin, one of the most commonly prescribed drugs.

Highlights

  • Using live-cell mass spectrometry (MS)-based quantification [13, 14], we previously showed that only 5.6% of the cellular human vitamin K epoxide reductase (VKOR) (hVKOR) carries reduced Cys132/Cys135, which is the catalytically active form assumed in previous studies (Fig. 1B)

  • Because hVKOR catalysis relies on electron transfer to proceed (Fig. S1), blocking the transfer may allow the capture of reaction intermediates during K epoxide (KO) reduction

  • The cell lysates were applied to a non-reducing SDS-PAGE to preserve cysteine links, and hVKOR species were subsequently detected by immunoblots

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Summary

43 S SH or

Previous studies assume that KO reduction initiates with reduced Cys132/Cys135. The reduction results in the oxidation of Cys132/Cys135 to form a disulfide. The catalytic activity of partially oxidized hVKOR is unclear from previous studies. State can provide two electrons, Cys43-SH and Cys135-SH If this PO state is catalytically active, it requires additional steps of electron transfer to reduce the substrates (Fig. S1). Comparison of the cellular activity and cellular cysteine status indicates that the PO and R states, despite of their different abundance, have similar contribution to the overall activity of hVKOR in cells. Because warfarin inhibits these two states with much different efficacy, warfarin may behave as a mixed inhibitor [15, 16]

Results
43 A 51 S 132 S
51 S or 51 S
16 NEM covalent complex More 1 2 3 4
Discussion
C43 C51 C132 C135 C96 C16 C85 Gel mobility shift
C C43A or C51A
Experimental procedures
43 SH 51 SH 132 S 135 S
43 SH 51 SH 132 SH 135 SH
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