Abstract

SummaryThe fungus Phakopsora pachyrhizi (Pp) causes Asian soybean rust (SBR) disease which provokes tremendous losses in global soybean production. Pp is mainly controlled with synthetic fungicides to which the fungus swiftly develops fungicide resistance. To substitute or complement synthetic fungicides in Asian soybean rust control, we aimed to identify antifungal metabolites in Arabidopsis which is not a host for Pp. Comparative transcriptional and metabolic profiling of the Pp‐inoculated Arabidopsis non‐host and the soybean host revealed induction of phenylpropanoid metabolism‐associated genes in both species but activation of scopoletin biosynthesis only in the resistant non‐host. Scopoletin is a coumarin and an antioxidant. In vitro experiments disclosed fungistatic activity of scopoletin against Pp, associated with reduced accumulation of reactive oxygen species (ROS) in fungal pre‐infection structures. Non‐antioxidant and antioxidant molecules including coumarins with a similar structure to scopoletin were inactive or much less effective at inhibiting fungal accumulation of ROS and germination of Pp spores. When sprayed onto Arabidopsis leaves, scopoletin also suppressed the formation of Pp pre‐infection structures and penetration of the plant. However, scopoletin neither directly activated defence nor did it prime Arabidopsis for enhanced defence, therefore emphasizing fungistatic activity as the exclusive mode of action of scopoletin against Pp. Because scopletin also protected soybean from Pp infection, the coumarin may serve as a natural fungicide or as a lead for the development of near‐to‐nature fungicides against Asian soybean rust.

Highlights

  • Soybean is the most important legume crop with a global production volume of approximately 335 million tonnes in 2016 (FAOSTAT, 2018; www.soystats.com)

  • Asian soybean rust (SBR), a devastating disease caused by Phakopsora pachyrhizi (Pp) poses a major threat to soybean production and world food security (Pennisi, 2010)

  • As scopoletin biosynthesis was induced in Arabidopsis but not soybean, we evaluated the capacity of scopoletin to protect soybean from SBR

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Summary

Introduction

Soybean is the most important legume crop with a global production volume of approximately 335 million tonnes in 2016 (FAOSTAT, 2018; www.soystats.com). No commercial soybean variety is resistant to all isolates of Pp (Goellner et al, 2010; Langenbach et al, 2016a) and single gene-mediated resistance is quickly overcome due to the vast genetic variability of the pathogen (Yorinori et al, 2005; Garcia et al, 2008; Yamaoka, 2014). SBR is currently mainly controlled with synthetic fungicides and their various mixtures, primarily those in the strobilurin (Quinone-outside-inhibitors; QoIs), triazole (demethylation inhibitors, DMIs), and succinate dehydrogenase inhibitor (SDHI) classes (Godoy et al, 2015, 2016; Langenbach et al, 2016a). A Pp variant with reduced sensitivity to SDHIs has been discovered in Brazil (Simo~es et al, 2018) only a few years after the first application of commercial SDHI-containing

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