Abstract

The DNA damage response (DDR) is a conglomerate of pathways designed to detect DNA damage and signal its presence to cell cycle checkpoints and to the repair machinery, allowing the cell to pause and mend the damage, or if the damage is too severe, to trigger apoptosis or senescence. Various DDR branches are regulated by kinases of the phosphatidylinositol 3-kinase-like protein kinase family, including ataxia-telangiectasia mutated (ATM) and ATM- and Rad3-related (ATR). Replication intermediates and linear double-stranded genomes of DNA viruses are perceived by the cell as DNA damage and activate the DDR. If allowed to operate, the DDR will stimulate ligation of viral genomes and will inhibit virus replication. To prevent this outcome, many DNA viruses evolved ways to limit the DDR. As part of its attack on the DDR, adenovirus utilizes various viral proteins to cause degradation of DDR proteins and to sequester the MRN damage sensor outside virus replication centers. Here we show that adenovirus evolved yet another novel mechanism to inhibit the DDR. The E4orf4 protein, together with its cellular partner PP2A, reduces phosphorylation of ATM and ATR substrates in virus-infected cells and in cells treated with DNA damaging drugs, and causes accumulation of damaged DNA in the drug-treated cells. ATM and ATR are not mutually required for inhibition of their signaling pathways by E4orf4. ATM and ATR deficiency as well as E4orf4 expression enhance infection efficiency. Furthermore, E4orf4, previously reported to induce cancer-specific cell death when expressed alone, sensitizes cells to killing by sub-lethal concentrations of DNA damaging drugs, likely because it inhibits DNA damage repair. These findings provide one explanation for the cancer-specificity of E4orf4-induced cell death as many cancers have DDR deficiencies leading to increased reliance on the remaining intact DDR pathways and to enhanced susceptibility to DDR inhibitors such as E4orf4. Thus DDR inhibition by E4orf4 contributes both to the efficiency of adenovirus replication and to the ability of E4orf4 to kill cancer cells.

Highlights

  • Genome integrity is constantly challenged by endogenous and exogenous agents that cause different kinds of DNA lesions

  • The cellular DNA damage response (DDR) network interprets the presence of replicating viral DNA genomes as DNA damage and strives to repair it, leading to inhibition of virus replication

  • In this study we identify a novel mechanism used by adenovirus to inhibit the DDR

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Summary

Introduction

Genome integrity is constantly challenged by endogenous and exogenous agents that cause different kinds of DNA lesions. The sensors recruit proteins that transduce the signal to chromatin, to cellular checkpoints and to the repair machinery [10]. Signal transducers include the phosphatidylinositol 3-kinase-like protein kinase (PIKK) family, including ataxia-telangiectasia mutated (ATM), ATM- and Rad3-related (ATR), and DNA-PK (reviewed in [11, 12]). PP2A plays an important role in the DDR by regulating the activity of PIKKs [14,15,16,17,18] and their substrates Chk, Chk, or γH2AX, which are part of the DDR signaling pathways [19,20,21,22,23,24]

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