Abstract
Simple SummaryThe most commonly diagnosed lung cancer is non-small-cell lung cancer (NSCLC). In contrast, the most frequent subtypes of NSCLC, accounting for 80% of cases, are ADC and SCC. Nevertheless, subtype identification is based on the diagnosis of characteristic gene mutations occurring in each subtype. The aim of the study was the metabolomics analysis of the early stage of NSCLC and the determination of new biochemical pathways differentiating the subtypes. Our studies demonstrated that there are new potential significant changes in the biochemical pathways involved in N-acylethanolamine (NAE) biosynthesis that distinguish early-stage SCC from ADC. Moreover, the analysis of the plasma of patients with COPD and NSCLC allows the exclusion of metabolites related to inflammation in the lungs and the identification of compounds characteristic of cancer. Our research indicates new pathways that have not been explored in NSCLC so far, which may have diagnostic, prognostic, and therapeutic potential.Identification of the NSCLC subtype at an early stage is still quite sophisticated. Metabolomics analysis of tissue and plasma of NSCLC patients may indicate new, and yet unknown, metabolic pathways active in the NSCLC. Our research characterized the metabolomics profile of tissue and plasma of patients with early and advanced NSCLC stage. Samples were subjected to thorough metabolomics analyses using liquid chromatography-mass spectrometry (LC-MS) technique. Tissue and/or plasma samples from 137 NSCLC patients were analyzed. Based on the early stage tissue analysis, more than 200 metabolites differentiating adenocarcinoma (ADC) and squamous cell lung carcinoma (SCC) subtypes as well as normal tissue, were identified. Most of the identified metabolites were amino acids, fatty acids, carnitines, lysoglycerophospholipids, sphingomyelins, plasmalogens and glycerophospholipids. Moreover, metabolites related to N-acyl ethanolamine (NAE) biosynthesis, namely glycerophospho (N-acyl) ethanolamines (GP-NAE), which discriminated early-stage SCC from ADC, have also been identified. On the other hand, the analysis of plasma of chronic obstructive pulmonary disease (COPD) and NSCLC patients allowed exclusion of the metabolites related to the inflammatory state in lungs and the identification of compounds (lysoglycerophospholipids, glycerophospholipids and sphingomyelins) truly characteristic to cancer. Our results, among already known, showed novel, thus far not described, metabolites discriminating NSCLC subtypes, especially in the early stage of cancer. Moreover, the presented results also indicated the activity of new metabolic pathways in NSCLC. Further investigations on the role of NAE biosynthesis pathways in the early stage of NSCLC may reveal new prognostic and diagnostic targets.
Highlights
Lung cancer is one of the five most often diagnosed diseases in the world
Close clustering of Quality control (QC) samples observed on Principal components analysis (PCA) plots provided in the Supplementary Materials (Figures S1 and S2 obtained for tissue samples data and Figure S3 obtained for plasma samples data) indicate the proper quality of obtained data
Advanced-stage tissue samples could be separated based on data obtained using reversed phase (RP) chromatography (Figure S4) but not hydrophilic interactions (HILIC) chromatography
Summary
Lung cancer is one of the five most often diagnosed diseases in the world. it is the leading cause of death from cancer. Metabolomics is still a new field of science, which has the potential to discover metabolic pathways altered by particular disease and subsequently propose novel diagnostic markers and targets for the therapy. Such analyses can be performed on various types of biological material. A limited number of studies have been published presenting the analysis of metabolic differences arising in lung cancer tissue. Farhmann et al and Wikoff et al studied early-stage lung cancer and identified various metabolic alterations associated with the ADC subtype [19,20]
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