Abstract

Upon activation by antigen, B cells form germinal centres where they clonally expand and introduce affinity‐enhancing mutations into their B‐cell receptor genes. Somatic mutagenesis and class switch recombination (CSR) in germinal centre B cells are initiated by the activation‐induced cytidine deaminase (AID). Upon germinal centre exit, B cells differentiate into antibody‐secreting plasma cells. Germinal centre maintenance and terminal fate choice require transcriptional reprogramming that associates with a substantial reconfiguration of DNA methylation patterns. Here we examine the role of ten‐eleven‐translocation (TET) proteins, enzymes that facilitate DNA demethylation and promote a permissive chromatin state by oxidizing 5‐methylcytosine, in antibody‐mediated immunity. Using a conditional gene ablation strategy, we show that TET2 and TET3 guide the transition of germinal centre B cells to antibody‐secreting plasma cells. Optimal AID expression requires TET function, and TET2 and TET3 double‐deficient germinal centre B cells show defects in CSR. However, TET2/TET3 double‐deficiency does not prevent the generation and selection of high‐affinity germinal centre B cells. Rather, combined TET2 and TET3 loss‐of‐function in germinal centre B cells favours C‐to‐T and G‐to‐A transition mutagenesis, a finding that may be of significance for understanding the aetiology of B‐cell lymphomas evolving in conditions of reduced TET function.

Highlights

  • Epigenetic regulation at the level of DNA is largely mediated by covalent addition of a methyl moiety at the 5th carbon of cytosines via DNA methyltransferases (DNMT) [1]. 5-methylcytosine (5mC), enriched in the context of CpG dinucleotides, associates with a local repression of gene expression [2]

  • The FEBS Journal published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies

  • TET2 and TET3 are expressed throughout B-cell development and terminal differentiation

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Summary

Introduction

Epigenetic regulation at the level of DNA is largely mediated by covalent addition of a methyl moiety at the 5th carbon of cytosines via DNA methyltransferases (DNMT) [1]. 5-methylcytosine (5mC), enriched in the context of CpG dinucleotides, associates with a local repression of gene expression [2]. It has been assumed that the DNA methylation patterns that are Abbreviations 5hmC, 5-hydroxymethylcytosine; 5mC, 5-methylcytosine; AID, activation-induced cytidine deaminase; BCR, B-cell antigen receptor; CB, centroblast; CC, centrocyte; CGG, chicken gammaglobulin; CSR, class switch recombination; DLBCL, Diffuse Large B-cell Lymphoma; DNMT, DNA methyltransferase; DZ, dark zone; FO, follicular; GC, germinal centre; iGC, induced germinal centre; LZ, light zone; MZ, marginal zone; NP, 4-hydroxy-3-nitrophenylacetyl; PC, plasma cell; RBC, red blood cell; SHM, somatic hypermutation; TET, ten-eleventranslocation. The FEBS Journal published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies Mounting evidence suggests that context-dependent changes in DNA methylation may be functional during postnatal lineage priming, commitment and cell function [3,4,5,6,7,8]

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