Testing genetic determinism in rate of hoof growth in pigs using Bayes Factors

Abstract

Abstract Excessive growth and consequent deformity of hooves is a frequent disorder in some purebred pig populations. A test to detect possible genetic determinism related with this phenomenon was performed using the Bayes Factor (BF). Data were available for females from three purebred selection lines: Landrace (561 records), Pietrain (183) and Large White (225). Animals were scored in four categories, according to the overall growth rate of their hooves. A Bayesian analysis was performed separately for each line using a threshold model with a probit approach, and Bayes Factors between models with and without additive genetic effects were computed. Results from the three lines showed that models exhibiting genetic variability were much more probable than those that did not include a genetic component, with BF values of 312, 35 and 40 (and posterior probabilities of 0.99, 0.97 and 0.98), respectively, for the Landrace, Pietrain and Large White lines. Monte Carlo estimates of posterior means of heritabilities were medium to high (0.25, 0.41 and 0.38, respectively), and the highest posterior density region for heritability at 99% did not include zero in any of the three lines. These results allow us to conclude that genetic determinism has an important influence upon the rate of hoof growth in the pig. A potential genetic response can be achieved in the populations analysed, but further studies are needed to determine the genetic architecture of hoof growth disorders in pigs.