Abstract
Telomeres, repetitive nucleoprotein complexes that protect chromosomal termini and prevent them from activating inappropriate DNA damage responses (DDRs), shorten with cell division and thus with aging. Here, we characterized the human cellular response to targeted telomeric double-strand breaks (DSBs) in telomerase-positive and telomerase-independent alternative lengthening of telomere (ALT) cells, specifically in G1 phase. Telomeric DSBs in human G1 cells elicited early signatures of a DDR; however, localization of 53BP1, an important regulator of resection at broken ends, was not observed at telomeric break sites. Consistent with this finding and previously reported repression of classical non-homologous end-joining (c-NHEJ) at telomeres, evidence for c-NHEJ was also lacking. Likewise, no evidence of homologous recombination (HR)-dependent repair of telomeric DSBs in G1 was observed. Rather, and supportive of rapid truncation events, telomeric DSBs in G1 human cells facilitated formation of extensive tracks of resected 5′ C-rich telomeric single-stranded (ss)DNA, a previously proposed marker of the recombination-dependent ALT pathway. Indeed, induction of telomeric DSBs in human ALT cells resulted in significant increases in 5′ C-rich (ss)telomeric DNA in G1, which rather than RPA, was bound by the complementary telomeric RNA, TERRA, presumably to protect these exposed ends so that they persist into S/G2 for telomerase-mediated or HR-dependent elongation, while also circumventing conventional repair pathways. Results demonstrate the remarkable adaptability of telomeres, and thus they have important implications for persistent telomeric DNA damage in normal human G1/G0 cells (e.g., lymphocytes), as well as for therapeutically relevant targets to improve treatment of ALT-positive tumors.
Highlights
Telomeres, specialized nucleoprotein complexes that “cap” the ends of linear chromosomes, are composed of highly conserved, G-rich tandem repeats [(5 -TTAGGG-3 )n in vertebrates] (Meyne et al, 1989)
To better understand human cellular responses to telomeric double-strand breaks (DSBs) throughout the cell cycle, we performed transient transfection experiments using a previously characterized plasmid encoding a flag-tagged telomere repeat-specific endonuclease fused to the human TRF1 gene (TRAS1-EN-TRF1: hereafter referred to as endonuclease TRAS1EN-TRF1 (EN-T)) that produces blunt-ended ended DSBs within telomeres (Anzai et al, 2001; Yoshitake et al, 2010)
While repair of targeted telomeric DSBs has been observed in cycling cell populations, as well as in S-phase, there is a dearth of evidence for DNA damage responses (DDRs) or repair activity at telomeric DSBs in G1 cells (Doksani and De Lange, 2016; Mao et al, 2016)
Summary
Telomeres, specialized nucleoprotein complexes that “cap” the ends of linear chromosomes, are composed of highly conserved, G-rich tandem repeats [(5 -TTAGGG-3 )n in vertebrates] (Meyne et al, 1989). Due to their repetitive nature and abundance of heterochromatic marks, telomeres were long regarded as silenced, non-transcribed features of the genome. Telomerase is the specialized reverse transcriptase capable of maintaining telomere length via RNA template-mediated addition of telomeric repeats onto the ends of newly replicated chromosomes. The ALT phenotype is relatively common in several subtypes of human sarcomas and astrocytomas, and has been observed in ∼4% of all tumor types, including carcinomas and pediatric glioblastoma multiformes (Heaphy et al, 2011)
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