Abstract

MyD88-dependent intracellular signalling cascades and subsequently NF-kappaB-mediated transcription lead to the dynamic inflammatory processes underlying the pathogenesis of rheumatoid arthritis (RA) and related autoimmune diseases. This study aimed to identify the effect of the MyD88 dimerization inhibitor, ST2825, as a modulator of pathogenic gene expression signatures and systemic inflammation in disease-modifying antirheumatic drugs (DMARDs)-naïve RA patients. We analyzed bulk RNA-seq from peripheral blood mononuclear cells (PBMC) in DMARDs-naïve RA patients after stimulation with LPS and IL-1β. The transcriptional profiles of ST2825-treated PBMC were analyzed to identify its therapeutic potential. Ingenuity Pathway Analysis was implemented to identify downregulated pathogenic processes. Our analysis revealed 631 differentially expressed genes between DMARDs-naïve RA patients before and after ST2825 treatment. ST2825-treated RA PBMC exhibited a gene expression signature similar to that of healthy controls PBMC by downregulating the expression of proinflammatory cytokines, chemokines and matrix metalloproteases. In addition, B cell receptor, IL-17 and IL-15 signalling were critically downregulated pathways by ST2825. Furthermore, we identified eight genes (MMP9, CXCL9, MZB1, FUT7, TGM2, IGLV1-51, LINC01010, and CDK1) involved in pathogenic processes that ST2825 can potentially inhibit in distinct cell types within the RA synovium. Overall, our findings indicate that targeting MyD88 effectively downregulates systemic inflammatory mediators and modulates the pathogenic processes in PBMC from DMARDs-naïve RA patients. ST2825 could also potentially inhibit upregulated genes in the RA synovium, preventing synovitis and joint degeneration.

Highlights

  • Rheumatoid arthritis (RA) is an autoimmune, inflammatorychronic and systemic disease of multifactorial etiology

  • Differentially expressed (DE) genes were used to identify Ingenuity Pathway Analysis (IPA)-predicted disease associations and functions upregulated in diseasemodifying antirheumatic drugs (DMARDs)-naïve RA patients compared with healthy subjects (Figure 1D) and as expected the top 5 IPA-predicted disease associations related to the upregulated genes were directly associated with RA or rheumatic disease processes, which fortify the successful characterization of samples used for this study

  • Canonical pathway analysis further supported these findings by revealing that B cell receptor, IL-15 and IL-17 signalling were critically downregulated pathways by the effect of ST2825 (Supplementary Figure S2B). These findings suggest that ST2825 effectively downregulates MyD88-dependent gene expression and pathogenic processes orchestrated by the effect of LPS in peripheral blood mononuclear cells (PBMC) from DMARDs-naïve RA patients

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Summary

Introduction

Rheumatoid arthritis (RA) is an autoimmune, inflammatorychronic and systemic disease of multifactorial etiology. Inflammatory mediators play an essential role in the joint pathology of RA by promoting synovitis, articular cartilage degeneration and bone loss. These critical mediators include the tumor necrosis factor (TNF)-α, interleukin (IL)-1β, and IL-6 (Aletaha and Smolen, 2018; Smolen et al, 2018). The development of biological diseasemodifying antirheumatic drugs (DMARDs), including antiTNF, anti-IL-1 and anti-IL-6 antibodies, have contributed to ameliorating patients’ disease status and delaying the RA progression (Brzustewicz and Bryl, 2015). A significant proportion of RA patients fail to show the desired response to the biological DMARDs, highlighting the need to develop additional therapeutics (Aletaha, 2020)

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