Abstract

Autosomal dominant non-syndromic hearing loss (ADNSHL) is highly heterogeneous, among them, KCNQ4 is one of the most frequent disease-causing genes. More than twenty KCNQ4 mutations have been reported, but none of them were detected in Chinese mainland families. In this study, we identified a novel KCNQ4 mutation in a five generation Chinese family with 84 members and a known KCNQ4 mutation in a six generation Chinese family with 66 members. Mutation screening of 30 genes for ADNSHL was performed in the probands from thirty large Chinese families with ADNSHL by targeted region capture and high-throughput sequencing. The candidate variants and the co-segregation of the phenotype were verified by polymerase chain reaction (PCR) amplification and Sanger sequencing in all ascertained family members. Then we identified a novel KCNQ4 mutation p.W275R in exon 5 and a known KCNQ4 mutation p.G285S in exon 6 in two large Chinese ADNSHL families segregating with post-lingual high frequency-involved and progressive sensorineural hearing loss. This is the first report of KCNQ4 mutation in Chinese mainland families. KCNQ4, a member of voltage-gated potassium channel family, is likely to be a common gene in Chinese patients with ADNSHL. The results also support that the combination of targeted enrichment and high-throughput sequencing is a valuable molecular diagnostic tool for autosomal dominant hereditary deafness.

Highlights

  • Hereditary hearing loss can be inherited in many patterns, such as autosomal dominant audosomal recessive, X-linked dominant, X-linked recessive, Y-linked pattern, among which Autosomal dominant non-syndromic hearing loss (ADNSHL) has strikingly genetic heterogeneity

  • Mutations in gene KCNQ4 have been associated with ADNSHL, recognized as one of the most frequent causes of ADNSHL, is characterized by post-lingual autosomal dominant non-syndromic progressive sensorineural hearing loss, first affected the high frequencies according to GeneReviews

  • We identified a known mutation and a novel mutation in the P-loop region of the KCNQ4 potassium channel which yielded dominant non-syndromic hearing loss by high-throughput sequencing as well as conventional genetic testing

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Summary

Introduction

Hereditary hearing loss can be inherited in many patterns, such as autosomal dominant audosomal recessive, X-linked dominant, X-linked recessive, Y-linked pattern, among which ADNSHL has strikingly genetic heterogeneity. More than 60 loci for ADNSHL have been mapped and only 30 corresponding genes have been identified (http://hereditaryhearingloss.org). During the past twenty years, linkage analysis and candidate gene sequencing has been proved to be a powerful tool to identify responsible genes for ADNSHL. Limited number of samples in the clinical part, the large number of genes in the mapped region, and the large size of many genes restrained the application of this method. High-throughput sequencing, known as next-generation sequencing (NGS) has been proved to be an ideal tool to decipher the genetic heterogeneity of deafness. More than ten deafness genes have been identified using NGS including TPRN, GPSM2, HSD17B4, MASP1, CACAM1, HARS2, SMPX, DNMT1, ABHD12, TSPEAR, TNC and P2RX2 [1,2,3]

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