Abstract

Most land plants form beneficial associations with arbuscular mycorrhizal (AM) fungi which improves mineral nutrition, mainly phosphorus, in the host plant in exchange for photosynthetically fixed carbon. Most of our knowledge on the AM symbiosis derives from dicotyledonous species. We show that inoculation with the AM fungus Funneliformis mosseae stimulates growth and increases Pi content in leaves of rice plants (O. sativa, cv Loto, ssp japonica). Although rice is a host for AM fungi, the systemic transcriptional responses to AM inoculation, and molecular mechanisms underlying AM symbiosis in rice remain largely elusive. Transcriptomic analysis identified genes systemically regulated in leaves of mycorrhizal rice plants, including genes with functions associated with the biosynthesis of phospholipids and non-phosphorus lipids (up-regulated and down-regulated, respectively). A coordinated regulation of genes involved in the biosynthesis of phospholipids and inositol polyphosphates, and genes involved in hormone biosynthesis and signaling (jasmonic acid, ethylene) occurs in leaves of mycorrhizal rice. Members of gene families playing a role in phosphate starvation responses and remobilization of Pi were down-regulated in leaves of mycorrhizal rice. These results demonstrated that the AM symbiosis is accompanied by systemic transcriptional responses, which are potentially important to maintain a stable symbiotic relationship in rice plants.

Highlights

  • Most land plants form beneficial associations with arbuscular mycorrhizal (AM) fungi which improves mineral nutrition, mainly phosphorus, in the host plant in exchange for photosynthetically fixed carbon

  • Evidence is presented that the AM symbiosis triggers coordinated regulations in the expression of genes involved in lipid signaling, hormone biosynthesis and signaling, and genes involved in Post-trancriptional regulation (Pi) homeostasis

  • Among the mycorrhiza down-regulated genes in rice leaves, we identified genes involved in the different steps of Jasmonic acid (JA) biosynthesis, namely Phospholipases A (PLA1-IIδ, PLA1-Iβ1, PLA1-Iγ1, pPLA-IIIα, pPLA-IIφ, pPLA-IIIβ, pPLA-IIIζ), Phospholipases C (PLC4, NPC1, NPC2, NPC3), Phospholipases D (PLDα2, PLDα3, PLDζ2, PLDφ), Lipoxygenases (OsLOX1, OsLOX2, OsLOX5, OsLOX6, OsLOX7, OsLOX8, OsHILOX, OsLOX), allene oxidase synthase (AOS) (OsAOS1, OsAOS2), allene oxide cyclase (AOC), and OPDA reductase (OPR) (OsOPR1, OsOPR7, OsOPR10) genes (Fig. 5A,B; Supplementary Table S4)

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Summary

Introduction

Most land plants form beneficial associations with arbuscular mycorrhizal (AM) fungi which improves mineral nutrition, mainly phosphorus, in the host plant in exchange for photosynthetically fixed carbon. Members of gene families playing a role in phosphate starvation responses and remobilization of Pi were down-regulated in leaves of mycorrhizal rice These results demonstrated that the AM symbiosis is accompanied by systemic transcriptional responses, which are potentially important to maintain a stable symbiotic relationship in rice plants. Evidence is presented that the AM symbiosis triggers coordinated regulations in the expression of genes involved in lipid signaling (phospholipids and non-phosphorus lipids), hormone biosynthesis and signaling (jasmonic acid, ethylene), and genes involved in Pi homeostasis. These results provided a global view of genes, and members of gene families, that will advance our understanding on mechanisms underlying the AM symbiosis in rice

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