Abstract

The isoflavone compound 3-(2,3-dihydrobenzo[b][1,4]dioxin-6-yl)-6-methoxy-4H-chromen-4-one (6) was prepared and structurally characterized using NMR, mass spectrum and X-ray crystallography. Compound 6, C18H14O5, was crystallized in the monoclinic space group P21/n with the cell parameters; a = 7.1869(4) Å, b = 10.2764(6) Å, c = 19.6771(10) Å, β = 99.442(2)°, V = 1433.57(14) Å3, Z = 4. In the title compound, the chromenone ring system is slightly twisted from planarity and the dihedral angle formed between the plane of the chromenone ring and benzene ring is 47.75°. Several intermolecular hydrogen bonds make the crystal stabilized in the three-dimensional structure, which was confirmed by Hirshfeld surface analysis. Density functional theory (DFT) calculations at the B3LYP/6-311++G(d,p) level were carried out and the calculated geometric parameters were compared with the experimental results. A frontier molecular orbital calculation was performed to reveal that the energy values of highest occupied molecular orbital (HOMO) and lowest un-occupied molecular orbital (LUMO) were −5.8223 eV and −1.8447 eV, and the HOMO–LUMO energy gap was 3.9783 eV. A clonogenic long-term survival assay of compound 6 against HCT116 human colon cancer cells showed an anti-cancer ability, with GI50 value of 24.9 μM. Docking experiments within the active sites of aurora kinase A and B were carried out to explain the anti-cancer property of compound 6.

Highlights

  • Flavonoids are widely distributed in plants, performing interactions as secondary metabolites.One of the characteristic flavonoid features is phytoalexins, which show self-defense abilities in plants.The self-defense system of flavonoids has been extensively modified to apply it to medicinal chemistry and has demonstrated antioxidant, anti-proliferative, anti-tumor, anti-microbial, anti-inflammatory and anti-cardiovascular disease properties [1,2,3,4,5,6,7,8]

  • The isoflavone compound 6 was prepared according to literature methods as shown in Scheme 1 [24,25]

  • The resulting solid was filtered and washed with cold methanol to give intermediate enamine (3) which was used for the reaction without further purification

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Summary

Introduction

Flavonoids are widely distributed in plants, performing interactions as secondary metabolites.One of the characteristic flavonoid features is phytoalexins, which show self-defense abilities in plants.The self-defense system of flavonoids has been extensively modified to apply it to medicinal chemistry and has demonstrated antioxidant, anti-proliferative, anti-tumor, anti-microbial, anti-inflammatory and anti-cardiovascular disease properties [1,2,3,4,5,6,7,8]. One of the characteristic flavonoid features is phytoalexins, which show self-defense abilities in plants. A recent review describes that flavones are one of the most important scaffolds for medicinal chemistry and their applications in pharmaceutical research are extremely diverse [10]. In silico methods, such as molecular docking, have been widely used in the target research of bioactive compounds, and the complete three-dimensional structures of substrates and proteins are the prerequisites for these processes [11,12,13]

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