Abstract

BackgroundLung cancer is the most common cause of cancer-related deaths worldwide. The aim of this study was to investigate the association of five extensively-studied polymorphisms in PTGS2 (rs689466, rs5275, rs20417) and CYP2E1 (rs2031920, rs6413432) genes with lung cancer risk in a large northeastern Chinese population.Methodology/Principal FindingsThis is a hospital-based case-control study involving 684 patients with lung cancer and 604 cancer-free controls. Genotyping was performed using the PCR-LDR method. Data were analyzed using Haplo.stats and MDR programs. There were significant differences between patients and controls in allele/genotype distributions of rs5275 (P = 0.002/0.003) and rs6413432 (P = 0.037/0.044), as well as in genotype distributions of rs689466 (P = 0.02). The risk for lung cancer associated with the rs5275-C mutant allele was decreased by 60% (95% CI [confidence interval]: 0.21–0.74; P = 0.004) under the recessive model. Carriers of rs689466-G mutant allele had a 28% (95% CI: 0.57–0.92; P = 0.008) reduced risk of developing lung cancer relative to the AA genotype carriers. In haplotype analysis, haplotype G-C-C-T (in order of rs689466, rs5275, rs2031920 and rs6413432) decreased the odds of lung cancer by 28% (95% CI: 0.51–0.93; P = 0.019) after adjusting for confounding factors, whereas haplotype A-T-T-T had 1.49-fold (95% CI: 1.21–1.79; P = 0.012) increased risk for lung cancer. Using MDR method, the overall best model including rs5275, rs689466 and rs6413432 polymorphisms was identified with a maximal testing accuracy of 66.1% and a maximal cross-validation consistency of 10 out of 10 (P = 0.003).Conclusions/SignificanceOur findings demonstrated a potentially synergistic association of PTGS2 and CYP2E1 polymorphisms with the underlying cause of lung cancer in northeastern Chinese.

Highlights

  • Lung cancer is the most common cause of cancer-related deaths worldwide

  • Given the importance of ethnic divergences in the genetic effects on complex diseases and the fact that genetic markers for proposed gene-disease associations vary in frequency across the populations, we evaluated five extensively studied polymorphisms in prostaglandin-endoperoxide synthase 2 (PTGS2) and CYP2E1 genes in a large northeastern Chinese population to examine their associations, both individually and in combination, with lung cancer risk

  • In this study we found significant associations of PTGS2 and CYP2E1 polymorphisms with the susceptibility to lung cancer in northeastern Chinese

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Summary

Introduction

Lung cancer is the most common cause of cancer-related deaths worldwide. The reduction of tobacco consumption is currently the major strategy to reduce lung cancer burden. Identification of genes involved in causing the disease could contribute to discovering the underlying mechanisms and lead to a comprehensive prevention strategy as well as targeted therapy [1]. Common genetic variants involved in lung cancer have been identified by genomewide association studies, detailed information about the genetic factors remains to be elucidated. It seems that rarer genetic variants are likely to account for most of the individual susceptibility [1]. The aim of this study was to investigate the association of five extensively-studied polymorphisms in PTGS2 (rs689466, rs5275, rs20417) and CYP2E1 (rs2031920, rs6413432) genes with lung cancer risk in a large northeastern Chinese population

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