Supramolecular structure of unnatural nucleobases: Revised structure of (2:1) 6-methylisocytosinium dihydrogen monophosphate adduct

Abstract

The solid-state supramolecular structure of 6-methylisocytosine dihydrogen monophosphate adduct [ 2 - NH 2 - 6 - CH 3 - C 4 H 2 N 2 O 2 ] 2 + · H 2 PO 4 - , has been determined by single-crystal X-ray diffraction at room temperature. In this paper a revised model, based on single proton transfer from one molecule of phosphoric acid to the pyridine N atoms opposite to the methyl substituent of the two aminooxo tautomers of 6-methylisocytosine, has been used for the crystal structure analysis of the ionic complex. 6-Methylisocytosine molecules form hemiprotonated centrosymmetric pairs by complementary WC triple hydrogen bonds. Dihydrogen phosphate anions act as bridges between charged WC dimers to generate ribbons via four cation-to anion N–H⋯O hydrogen bonds. Ribbons are then interconnected to form a three-dimensional network by means of a further series of O–H⋯O anion-to-cation hydrogen bonds.