Abstract

Sugar transporters play a crucial role for plant productivity, as they coordinate sugar fluxes from source leaf towards sink organs (seed, fruit, root) and regulate the supply of carbon resources towards the microorganisms of the rhizosphere (bacteria and fungi). Thus, sugar fluxes mediated by SUT (sucrose transporters), MST (monosaccharide transporters) and SWEET (sugar will eventually be exported transporters) families are key determinants of crop yield and shape the microbial communities living in the soil. In this work, we performed a systematic search for sugar transporters in Fabaceae genomes, focusing on model and agronomical plants. Here, we update the inventory of sugar transporter families mining the latest version of the Medicago truncatula genome and identify for the first time SUT MST and SWEET families of the agricultural crop Pisum sativum. The sugar transporter families of these Fabaceae species comprise respectively 7 MtSUT 7 PsSUT, 72 MtMST 59 PsMST and 26 MtSWEET 22 PsSWEET. Our comprehensive phylogenetic analysis sets a milestone for the scientific community, as we propose a new and simple nomenclature to correctly name SUT MST and SWEET families. Then, we searched for transcriptomic data available for our gene repertoire. We show that several clusters of homologous genes are co-expressed in different organs, suggesting that orthologous sugar transporters may have a conserved function. We focused our analysis on gene candidates that may be involved in remobilizing resources during flowering, grain filling and in allocating carbon towards roots colonized by arbuscular mycorrhizal fungi and Rhizobia. Our findings open new perspectives for agroecological applications in legume crops, as for instance improving the yield and quality of seed productions and promoting the use of symbiotic microorganisms.

Highlights

  • Legumes have provided a sustainable source of proteins and starch for humans and animals since the earliest of civilizations

  • Sugar transporters from the monosaccharide transporters (MST), sucrose transporters (SUT) and SWEET families have been shaped through natural selection for their specificity to supply carbon towards beneficial root microorganisms [5] and by human domestication to improve the nutritional values of grain crops [6]

  • We identified 30 MtSTP and 21 PsSTP divided in eight subclades (STP1, STP2, STP3, STP4, STP5, STP7, STP13, STP14); 11MtPLT and 12 PsPLT divided in three subclades (PLT1, PLT3 and PLT4); 5 MtTMT and 4 PsTMT divided in two subclades (TMT1 and TMT2); 9 MtINT and 5 PsINT divided in two subclades (INT1 and INT2); 5 MtpGlcT/SGB and 6 PspGlcT/SGB divided in plastidic glucose transporter (pGlcT) and SGB subclades; 2 MtVGT and 2 PsVGT in a single VGT clade; 10 MtESL and 9 PsESL divided in three subclades (ESL1, ESL2 and ESL3)

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Summary

Introduction

Legumes ( called pulses) have provided a sustainable source of proteins and starch for humans and animals since the earliest of civilizations. Legumes are considered as agroecological crops, that can sustainably render nutrients available to subsequent crops without using any fertilizers [2, 3] This is made possible through their root association with beneficial organisms naturally present in the soil biodiversity. Sugar transporters from the MST, SUT and SWEET families have been shaped through natural selection for their specificity to supply carbon towards beneficial root microorganisms [5] and by human domestication to improve the nutritional values of grain crops [6]. Complete inventory of sugar transporter gene families is only reported in a limited number of legume species. We release complete sugar transporter families (SUT MST and SWEET) of Fabaceae species, focusing primarily on the model plant Medicago truncatula and the agricultural crop Pisum sativum. We screen for gene candidates involved in sugar transport towards major carbon sinks, as for instance gene clusters potentially filling nutrients into seeds and supplying carbon towards symbiotic bacteria and fungi

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