Structure and function of kinetoplast DNA.

Abstract

SYNOPSISCells of the order Kinetoplastida possess a single mitochondrion which contains a large amount of a uniquely organized DNA. This kinetoplastic DNA (K‐DNA), representing 10–20% of the total cell DNA in different species, has as its major molecular component a small closed circular molecule present in large numbers. The size and thereby the amount of genetic information carried by the minicircles varies from species to species: Leishmania tarentolae and the Salivarian trypanosomes have the smallest, the Stercorarian trypanosomes Trypanosoma lewisi and Trypanosoma cruzi intermediate, and Crithidia and also Trypanosoma mega the largest minicircles. In L. tarentolae, purified minicircles, which are the size of 1 gene, have been shown by renaturation kinetics to consist of only 1 or 2 classes. L. tarentolae K‐DNA also contains another molecular species—a long molecule which may represent up to 30% of the total K‐DNA. The minicircles, nevertheless, represent a gene amplification of the order of 104. In all species that have been examined so far, the K‐DNA consists of a single sheet of interlocked closed circular molecules which can be isolated in an intact form because of its resistance to shear forces and its high molecular weight. In addition, at least in L. tarentolae, 6–9% of the K‐DNA is either free in the mitochondrion or loosely bound. The main K‐DNA structure has been termed a “network” and can be seen in the light microscope after staining in solution with acridine orange or after fixing and staining with Giemsa's, or in the electron microscope. The quaternary structure of such networks in terms of the organization of minicircles and long molecules is not understood. Controlled breakdown of networks from L. tarentolae was achieved by sonication, and the release of open and closed monomeric minicircles, catenated dimers, trimers and higher oligomers, and short linear fragments was measured. A maximum of 43% of the total network DNA was released in the form of closed monomers, dimers, and trimers, thus providing a minimal estimate for the percentage of minicircles in K‐DNA from this species. K‐DNA replicates fairly synchronously with nuclear DNA in all species that have been examined. Replication of DNA molecules in the kinetoplast networks is limited to the periphery, as seen in autoradiographs of networks isolated from cells (L. tarentolae, Crithidia fasciculata) pulsed with 3H‐thymidine. The molecular implications of this unusual replication pattern remain an open question, as does the genetic function of the K‐DNA itself.