Abstract

Positive strand RNA viruses, such as dengue virus type 2 (DENV2) expand and structurally alter ER membranes to optimize cellular communication pathways that promote viral replicative needs. These complex rearrangements require significant protein scaffolding as well as changes to the ER chemical composition to support these structures. We have previously shown that the lipid abundance and repertoire of host cells are significantly altered during infection with these viruses. Specifically, enzymes in the lipid biosynthesis pathway such as fatty acid synthase (FAS) are recruited to viral replication sites by interaction with viral proteins and displayed enhanced activities during infection. We have now identified that events downstream of FAS (fatty acid desaturation) are critical for virus replication. In this study we screened enzymes in the unsaturated fatty acid (UFA) biosynthetic pathway and found that the rate-limiting enzyme in monounsaturated fatty acid biosynthesis, stearoyl-CoA desaturase 1 (SCD1), is indispensable for DENV2 replication. The enzymatic activity of SCD1, was required for viral genome replication and particle release, and it was regulated in a time-dependent manner with a stringent requirement early during viral infection. As infection progressed, SCD1 protein expression levels were inversely correlated with the concentration of viral dsRNA in the cell. This modulation of SCD1, coinciding with the stage of viral replication, highlighted its function as a trigger of early infection and an enzyme that controlled alternate lipid requirements during early versus advanced infections. Loss of function of this enzyme disrupted structural alterations of assembled viral particles rendering them non-infectious and immature and defective in viral entry. This study identifies the complex involvement of SCD1 in DENV2 infection and demonstrates that these viruses alter ER lipid composition to increase infectivity of the virus particles.

Highlights

  • Phospholipids are critical for membrane structure, function and stability of eukaryotic cells

  • We hypothesized that enzymes in the Unsaturated fatty acids (UFA) biosynthesis pathway are important for the dengue virus type 2 (DENV2) lifecycle and interrogated this pathway with siRNAs (S1 Table) to determine effects of their transient knock-down on viral replication (Fig 1 and S1 Fig)

  • We found that knockdown of stearoyl-CoA desaturase 1 (SCD1) expression significantly reduced DENV2 replication in all cell lines and conditions tested when compared to an irrelevant siRNA (Fig 1A, B and 1C and S1A and S1B Fig)

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Summary

Introduction

Phospholipids are critical for membrane structure, function and stability of eukaryotic cells. Unsaturated fatty acids (UFA) are generated in the cytoplasm and after their initial desaturation they are further elongated, desaturated and shunted towards triglyceride, cholesterol ester or phospholipid synthesis. This initial desaturation event is the rate-limiting step in UFA biosynthesis and is catalyzed at the Δ9 position in the carbon chain by stearoyl CoA desaturase (SCD) [3, 4]. SCD1 is a 40 kD integral membrane protein in the endoplasmic reticulum (ER) and is highly conserved from bacteria to mammals [6] It regulates the balance between saturated and monounsaturated fatty acids (MUFA) in the cell

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