Abstract

BackgroundMaternal Embryonic Leucine Zipper Kinase (MELK) is a serine/threonine kinase involved in cell cycle, differentiation, proliferation, and apoptosis. These multiple features are consistent with it being a potential anticancer target. Nevertheless, the MELK pathway in tumorigenesis is not yet completely understood. This study aims to identify proteins associated with MELK pathway in astrocytomas. To this end, proteomic data of the human glioma cell line U87MG transfected with siRNA for MELK were compared with non-target transfected control cells and compared with oligonucleotide microarray data.ResultsIn both assays, we identified stathmin/oncoprotein 18 (STMN1), involved in cell cycle. STMN1 gene expression was further assessed in a series of 154 astrocytomas and 22 non-neoplastic brain samples by qRT-PCR. STMN1 expression was significantly increased in malignant diffusely infiltrative astrocytomas compared with pilocytic astrocytoma (p < 0.0001). A strong correlation between MELK and STMN1 expressions was observed (r = 0.741, p < 0.0001) in glioblastoma (GBM) samples. However, no difference on survival times was found when compared GBM cases with upregulated and downregulated STMN1 (Breslow = 0.092, median survival time: 11 and 13 months, respectively). Functional assays knocking down MELK by siRNA in GBM cell line showed that gene and protein expression of both MELK and stathmin were diminished. On the other hand, when the same analysis was performed for STMN1, only stathmin gene and protein was silenced.ConclusionsThe results presented herein point stahtmin as a downstream target in the MELK pathway that plays a role in malignant progression of astrocytomas.Electronic supplementary materialThe online version of this article (doi:10.1186/s12953-016-0094-9) contains supplementary material, which is available to authorized users.

Highlights

  • Maternal Embryonic Leucine Zipper Kinase (MELK) is a serine/threonine kinase involved in cell cycle, differentiation, proliferation, and apoptosis

  • Stathmin is one of the proteins identified as downregulated when MELK is knocked down A proteomic study based in 2DE was performed to analyze proteome changes in U87MG cells in which MELK was knocked down

  • stathmin/oncoprotein 18 (STMN1) was confirmed as down-regulated after knocking down MELK Following the selection criteria regarding data mining, gene annotation and in silico validation from an initial 44,000 genes analyzed on the oligonucleotide microarray assays, we found 667 overrepresented common genes with a fold change (NTC/MELK) ≥ 2 in two independent experiments

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Summary

Introduction

Maternal Embryonic Leucine Zipper Kinase (MELK) is a serine/threonine kinase involved in cell cycle, differentiation, proliferation, and apoptosis These multiple features are consistent with it being a potential anticancer target. Marie et al Proteome Science (2016) 14:6 provide both mechanistic insight regarding tumour establishment and progression as well as potential targets for the development of new anticancer drugs. In this context, serine/threonine kinases represent an extensively examined protein class, and targeting these molecules in a specific manner has proven to be very effective and to minimize unfavourable side effects [8]

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