Abstract

BackgroundDeregulated cell cycle progression and loss of proliferation control are key properties of malignant cells. In previous studies, an interactive transcript abundance index (ITAI) comprising three cell cycle control genes, [MYC × E2F1]/p21 accurately distinguished normal from malignant bronchial epithelial cells (BEC), using a cut-off threshold of 7,000. This cut-off is represented by a line with a slope of 7,000 on a bivariate plot of p21 versus [MYC × E2F1], with malignant BEC above the line and normal BEC below the line. This study was an effort to better quantify, at the transcript abundance level, the difference between normal and malignant BEC. The hypothesis was tested that experimental elevation of p21 in a malignant BEC line would decrease the value of the [MYC × E2F1]/p21 ITAI to a level below this line, resulting in loss of immortality and limited cell population doubling capacity. In order to test the hypothesis, a p21 expression vector was transfected into the A549 human bronchogenic carcinoma cell line, which has low constitutive p21 TA expression relative to normal BEC.ResultsFollowing transfection of p21, four A549/p21 clones with stable two-fold up-regulated p21 expression were isolated and expanded. For each clone, the increase in p21 transcript abundance (TA) was associated with increased total p21 protein level, more than 5-fold reduction in E2F1 TA, and 10-fold reduction in the [MYC × E2F1]/p21 ITAI to a value below the cut-off threshold. These changes in regulation of cell cycle control genes were associated with restoration of cell proliferation control. Specifically, each transfectant was capable of only 15 population doublings compared with unlimited population doublings for parental A549. This change was associated with an approximate 2-fold increase in population doubling time to 38.4 hours (from 22.3 hrs), resumption of contact-inhibition, and reduced dividing cell fraction as measured by flow cytometric DNA analysis.ConclusionThese results, likely due to increased p21-mediated down-regulation of E2F1 TA at the G1/S phase transition, are consistent with our hypothesis. Specifically, they provide experimental confirmation that a line with slope of 7,000 on the p21 versus [MYC × E2F1] bivariate plot quantifies the difference between normal and malignant BEC at the level of transcript abundance.

Highlights

  • Deregulated cell cycle progression and loss of proliferation control are key properties of malignant cells

  • Because the data are all numerical and standardized, they are combined into interactive transcript abundance indices (ITAI)

  • Determination of the interactive transcript abundance index (ITAI) cut-off value that separates normal from malignant bronchial epithelial cells (BEC) Previously, we reported that a cut-off threshold of 7,000 for the [MYC × E2F1]/p21 ITAI accurately distinguishes normal from malignant BEC [8]

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Summary

Introduction

Deregulated cell cycle progression and loss of proliferation control are key properties of malignant cells. An interactive transcript abundance index (ITAI) comprising three cell cycle control genes, [MYC × E2F1]/p21 accurately distinguished normal from malignant bronchial epithelial cells (BEC), using a cut-off threshold of 7,000. This cut-off is represented by a line with a slope of 7,000 on a bivariate plot of p21 versus [MYC × E2F1], with malignant BEC above the line and normal BEC below the line. StaRT-PCR was used to measure the transcript abundance (TA) values of fifteen cell proliferation control genes (including MYC, E2F1, p21, RB1, PCNA, cyclin D2, cyclin D3, and p53) [6]. TA values for any single gene did not accurately distinguish normal from malignant human bronchial epithelial cells (BEC), an ITAI in the form of [MYC × E2F1]/ p21 (using a cut-off value of 7,000) was accurate [2,6,8]

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