Abstract

The effect of a naphthalimide pharmacophore coupled with diverse substituents on the interaction between naphthalimide-polyamine conjugates 1–4 and bovine serum albumin (BSA) was studied by UV absorption, fluorescence and circular dichroism (CD) spectroscopy under physiological conditions (pH = 7.4). The observed spectral quenching of BSA by the compounds indicated that they could bind to BSA. Furthermore, caloric fluorescent tests revealed that the quenching mechanisms of compounds 1–3 were basically static type, but that of compound 4 was closer to a classical type. The Ksv values at room temperature for compound-BSA complexes-1-BSA, 2-BSA, 3-BSA and 4-BSA were 1.438 × 104, 3.190 × 104, 5.700 × 104 and 4.745 × 105, respectively, compared with the value of MINS, 2.863 × 104 at Ex = 280 nm. The obtained quenching constant, binding constant and thermodynamic parameter suggested that the binding between compounds 1–4 with BSA protein, significantly affected by the substituted groups on the naphthalene backbone, was formed by hydrogen bonds, and other principle forces mainly consisting of charged and hydrophobic interactions. Based on results from the analysis of synchronous three-dimensional fluorescence and CD spectra, we can conclude that the interaction between compounds 1–4 and BSA protein has little impact on the BSA conformation. Calculated results obtained from in silico molecular simulation showed that compound 1 did not prefer either enzymatic drug sites I or II over the other. However, DSII in BSA was more beneficial than DSI for the binding between compounds 2–4 and BSA protein. The binding between compounds 1–3 and BSA was hydrophobic in nature, compared with the electrostatic interaction between compound 4 and BSA.

Highlights

  • Proteins are important chemical substances in cellular life and a major target for many types of medicine; changes of their contents in serum can display human health conditions [1,2].Serum albumin (SA), including bovine serum albumin (BSA) and human serum albumin (HSA), is the main soluble protein constituent of the circulatory system

  • The free BSA had a peak at 278 nm (Figure 2), which was obviously increased with elevated concentrations of compounds

  • The spectral result of compound 2 indicated that it penetrated the hydrophobic sites of BSA sub-domain and bonded with the chromophores of tyrosine and tryptophan residues, and other unbonded residues were buried in a hydrophobic cave [21]

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Summary

Introduction

Proteins are important chemical substances in cellular life and a major target for many types of medicine; changes of their contents in serum can display human health conditions [1,2]. Serum albumin (SA), including bovine serum albumin (BSA) and human serum albumin (HSA), is the main soluble protein constituent of the circulatory system. Due to its medical importance, low cost, ready availability, unusual ligand-binding properties and similarity to human serum albumin (HSA) in terms of spatial structure and chemical composition [6,7,8], BSA was selected as the model protein for this research. Naphthalimide-polyamine conjugates have been proven to exhibit good activity in vitro [15,16,17,18], intercalate DNA base pairs, and cause conformational variations in DNA [19]. The binding constants and main types of binding force therein were investigated

UV Spectroscopic Characteristics
Fluorescence Quenching
Fluorescence Quenching Mechanism
Interaction Mode between Compounds 1–4 and BSA
Synchronous Fluorescence Spectroscopy
Three-Dimensional Fluorescence Spectroscopy Analysis
CD Measurement
Docking Analysis
Apparatus
Materials
UV-Vis Measurements
Fluorescence Measurement
Fluorescence Lifetime Measurement
Molecular Modeling Study
Conclusions
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