Abstract

Monitoring the distribution of marine biodiversity is a crucial step to better assess the impacts of global changes. Arctic marine fauna is dominated by amphipods in terms of abundance and biomass. These peracarids are an important marine order of crustaceans but the number of species found in the different Canadian oceans is currently unknown. Furthermore, most species are difficult to identify due to poor taxonomic descriptions and morphological convergence. The aim of this study was to assess the species diversity of marine amphipods in the three Canadian oceans using DNA barcoding. To do so, we produced a database of DNA barcodes of amphipods from the three Canadian Oceans publicly available from the BOLD website to which we added 310 new sequences from the Canadian Arctic Archipelago. We first delimited amphipod species based on barcode gap detection techniques and tree based method (bPTP) and then compared the composition of amphipods among the three oceans in order to assess the influence of past transarctic exchanges on Arctic diversity. Our analysis of 2309 sequences which represent more than 250 provisional species revealed a high connectivity between the Atlantic and Arctic Oceans. Our results also suggest that a single threshold to delimitate species is not suitable for amphipods. This study highlights the challenges involved in species delimitation and the need to obtain complete barcoding inventories in marine invertebrates.

Highlights

  • Oceans cover most of the planet, but are still poorly known in terms of biological composition and species richness [1,2,3,4]

  • All sequences were clustered into 28 molecular operational taxonomic units (MOTUs) representing 26 Barcode Index Number (BIN) of which 3 were uniques

  • We found around 270 species which is less than the number of MOTUs found with BOLD (285) and less than the number of MOTUs found with Automatic Barcode Gap Discovery (ABGD) (242)

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Summary

Introduction

Oceans cover most of the planet, but are still poorly known in terms of biological composition and species richness [1,2,3,4]. As climate changes and human pressures are growing, understanding the distribution of marine biodiversity is a crucial step towards an effective monitoring of marine ecosystems [2]. Numerous species of marine invertebrates are still awaiting taxonomic description [4]. The identification and estimation of species diversity based on a single genetic locus often appears the best option available for groups for which taxonomy is poor or inexistent [5, 6]. DNA barcoding proposed by [7] is a method for identifying unknown specimens to taxonomic entities based on sequence similarity of mitochondrial DNA (mtDNA) sequences [8, 9].

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