Abstract

We report the solid-state structural properties of alloxazine, a tricyclic ring system found in many biologically important molecules, with structure determination carried out directly from powder X-ray diffraction (XRD) data. As the crystal structures containing the alloxazine and isoalloxazine tautomers both give a high-quality fit to the powder XRD data in Rietveld refinement, other techniques are required to establish the tautomeric form in the solid state. In particular, high-resolution solid-state 15N NMR data support the presence of the alloxazine tautomer, based on comparison between isotropic chemical shifts in the experimental 15N NMR spectrum and the corresponding values calculated for the crystal structures containing the alloxazine and isoalloxazine tautomers. Furthermore, periodic DFT-D calculations at the PBE0-MBD level indicate that the crystal structure containing the alloxazine tautomer has significantly lower energy. We also report computational investigations of the interconversion between the tautomeric forms in the crystal structure via proton transfer along two intermolecular N–H···N hydrogen bonds; DFT-D calculations at the PBE0-MBD level indicate that the tautomeric interconversion is associated with a lower energy transition state for a mechanism involving concerted (rather than sequential) proton transfer along the two hydrogen bonds. However, based on the relative energies of the crystal structures containing the alloxazine and isoalloxazine tautomers, it is estimated that under conditions of thermal equilibrium at ambient temperature, more than 99.9% of the molecules in the crystal structure will exist as the alloxazine tautomer.

Highlights

  • The heterocyclic alloxazine/isoalloxazine ring system is found in many biologically important molecules

  • We report the solid-state structural properties of alloxazine, determined from powder X-ray diffraction (XRD) data in conjunction with insights derived from solid-state NMR spectroscopy and DFT-D calculations, which provide important independent evidence allowing the assignment of the tautomeric form that exists in the crystal structure

  • The powder XRD data alone cannot definitively establish the tautomeric form present in the crystal structure, as the only significant difference between the crystal structures containing the alloxazine and isoalloxazine tautomers concerns the position of one hydrogen atom in the asymmetric unit

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Summary

Introduction

The heterocyclic alloxazine/isoalloxazine ring system is found in many biologically important molecules. It is present in all flavins, such as riboflavin, flavin mononucleotide (FMN), and flavin adenine dinucleotide (FAD); both FMN and FAD are crucial coenzymes for redox processes in a wide range of biological systems.[1] The alloxazine molecule 1) may exist in two tautomeric forms, referred to as alloxazine and isoalloxazine, which differ in the position of one hydrogen atom. Single-crystal X-ray diffraction (XRD) is the most powerful and routine method for crystal structure determination, this technique relies on the availability of a singlecrystal specimen of suitable size and quality. When a suitable single crystal cannot be prepared, it is necessary instead to use Received: September 25, 2021 Revised: October 25, 2021

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