Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community.

Yang Zhou,Qing Yao,Honghui Zhu

doi:10.3389/fmicb.2020.594890

Abstract

Plant-derived carbon (PDC) released by roots has a strong effect on root-associated bacterial community, which is critical for plant fitness in natural environments. However, the freshly exuded PDC can be diluted by the ancient soil-derived carbon (SDC) at a short distance from root apices. Thus, the rhizosphere C pools are normally dominated by SDC rather than PDC. Yet, how PDC and SDC interact to regulate root-associated bacterial community is largely unknown. In this study, a grass species and a legume species were planted in two contrasting matrixes, quartz sand and soil, to assess the role of PDC and SDC in regulating root-associated bacterial community, and to explore whether SDC affects the influence of PDC on bacterial community in soil. Our results indicated that the legume plant showed significantly positive priming effect on soil organic matter decomposition but the grass plant did not. PDC significantly shaped bacterial community in sand culture as indicated by PCR-DGGE and high-throughput sequencing of bacterial 16S rRNA gene. Intriguingly, we found that dissimilarity of bacterial communities associated with two plant species and the percentage of specific OTUs in quartz sand were significantly higher than those in soil. Moreover, several biomarkers enriched by plants in quartz sand turned to be general taxa in soil, which indicated that SDC attenuated the regulation of bacterial community by PDC. Taken together, these results suggest that SDC interacted with PDC and the root-associated microbial community, thus acted as soil buffering component of biological process contributing to soil resilience. The importance of PDC in structuring rhizosphere bacterial community needs to be reconsidered in the context of wider contribution of other C pool, such as SDC.

Highlights

Plants can support relatively active microbial community in rhizosphere compared to that in the bulk soil (Paterson et al, 2007; Dennis et al, 2010; Haney et al, 2015; Schneijderberg et al, 2020)
Since the quartz sand was acid-rinsed before use and the visible root debris were carefully removed after sampling, the measured organic C content in sand samples of PN and SG can represent plant rhizodeposits, that is, Plant-derived carbon (PDC) available for bacteria
Our results showed that PDC significantly affected bacterial community in sand with some taxa enriched in grass or legume (Figure 3, Supplementary Table 1)

Summary

Introduction

Plants can support relatively active microbial community in rhizosphere compared to that in the bulk soil (Paterson et al, 2007; Dennis et al, 2010; Haney et al, 2015; Schneijderberg et al, 2020). As carbon (C) and nitrogen (N) sources, can be assimilated by microorganisms rapidly within a few hours or days (Dakora and Phillips, 2002; Dennis et al, 2010). This biological process results in a dynamic microbial community and a fast soil nutrient cycling (Huo et al, 2017). It is well acknowledged that plants shape rootassociated microbial community mainly via the rhizodeposits (Tian et al, 2020)

Methods

Results

Discussion

Conclusion