SLC3A2 N‐glycosylation and alternate evolutionary trajectories for amino acid metabolism

Abstract

Cancer and other proliferative diseases are driven by cooperative rewiring of growth signaling and metabolism, where posttranslational modifications to proteins play a critical role in maintaining the disease state. Most PTMs require metabolites as donor substrates, providing underappreciated link between metabolism and signaling. Protein N‐glycosylation and Golgi remodeling of N‐glycan on receptor kinases, T cell receptor, glucagon receptor, and glucose transporters provides feedback between signaling and metabolism. In turn, N‐glycosylation requires uridine diphosphate N‐acetylglucosamine (UDP‐GlcNAc), generated by the hexosamine biosynthesis pathway (HBP) from glucose, glutamine and acetyl‐CoA, where the flux of these substrates into UDP‐GlcNAc are in competition with glycolysis, glutaminolysis and fatty‐acid turnover. Thus, N‐glycan branching, a pathway of N‐acetylglucosaminyltransferases (MGAT1, 2, 4 and 5, avian 6) in the Golgi, is a sensor of central metabolism.In a search for additional glycoproteins that link metabolism, N‐glycosylation and signaling, we identified SLC3A2 (4F2hc, CD98),an adaptor to amino acid (AA) transporters SLC7A5‐11, ‐13 which stabilizes cell surface residency. The SLC3A2*SLC7A5 exchanger imports essential AA that stimulate mTOR signaling and anabolic metabolism, while SLC3A2*SLC7A11 supports glutathione synthesis and mitigation of oxidative stress. Analysis of SLC3A2 N‐glycans revealed stable site‐specific profiles of Golgi remodeling, with the exception of the conserved N365 where branching and poly‐N‐acetyllactosamine content were sensitive to the insertion of lost ancestral sites and to HBP. The N‐glycans are positioned to promote galectin‐mediated clustering with N‐glycosylated Na++/AA symporters and enhance diffusion‐limited flux between exchangers and AA /Na+ symporters. In a successful experiment of Nature, SLC3A2 has been deleted in Neoaves, a clade representing 95% of Ave species that are adapted for flapping flight, the most metabolically intense form of vertebrate locomotion. Neoaves have also acquired a unique N‐glycan branching specificity GnT‐VI (Mgat6, Q9DGD1), which may support an alternate clustering of N‐glycosylated transporters. KEAP1, and four SLC7A family exchangers are also absent, and two others have duplicated, consistent with a shift in metabolic imperatives of Neoaves. The fate of these genes in Primates, Neoaves and Naked mole rat highlights the tension between metabolic rates and oxidative stress that govern lifestyle and longevity.