Site-specific retrotransposons of the trypanosomatid protozoa

Abstract

Retrotronsposons are mobile genetic elements that have invaded a wide variety of organisms. While these mobile elements share gene homologies and structural features with retroviruses, they have lost the ability to produce infectious particles. Typically these elements are 5–10 kilobases (kb) in length, are conserved in their structural organization and are present in many copies in the genomes into which they have integrated 1. Retrotronsposons generally interrupt their host genome promiscuously and thus cause a variety of random effects. In general, their insertion results in mutations, inversions, deletions or rearrangements among host sequences. All of these changes are thought to add to the plasticity of the host genome and thus contribute to a faster pace of evolutionary development. However, because of the random nature of insertions, it has been difficult to attribute any one specific function to these diverse elements. Here, Serap Aksoy describes a newly recognized family of mobile elements that are different from most retrotronsposons in that they have the ability to integrate into specific host sequences.