Abstract

Siroheme is the central cofactor in a conserved class of sulfite and nitrite reductases that catalyze the six-electron reduction of sulfite to sulfide and nitrite to ammonia. In Salmonella enterica serovar Typhimurium, siroheme is produced by a trifunctional enzyme, siroheme synthase (CysG). A bifunctional active site that is distinct from its methyltransferase activity catalyzes the final two steps, NAD+-dependent dehydrogenation and iron chelation. How this active site performs such different chemistries is unknown. Here, we report the structures of CysG bound to precorrin-2, the initial substrate; sirohydrochlorin, the dehydrogenation product/chelation substrate; and a cobalt-sirohydrochlorin product. We identified binding poses for all three tetrapyrroles and tested the roles of specific amino acids in both activities to give insights into how a bifunctional active site catalyzes two different chemistries and acts as an iron-specific chelatase in the final step of siroheme synthesis.

Highlights

  • Siroheme is the central cofactor in a conserved class of sulfite and nitrite reductases that catalyze the six-electron reduction of sulfite to sulfide and nitrite to ammonia

  • S. enterica S128A-CysG was recombinantly expressed in E. coli and purified to homogeneity for crystallization and biochemical analysis

  • Uro’gen III methylation is catalyzed by a dimeric SAM-dependent uro’gen III methyltransferases (SUMTs) homologous to SUMTs involved in vitamin B12 biosynthesis[10]

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Summary

Introduction

Siroheme is the central cofactor in a conserved class of sulfite and nitrite reductases that catalyze the six-electron reduction of sulfite to sulfide and nitrite to ammonia. A bifunctional active site that is distinct from its methyltransferase activity catalyzes the final two steps, NAD+-dependent dehydrogenation and iron chelation. How this active site performs such different chemistries is unknown. 1234567890():,; Siroheme is the modified isobacteriochlorin tetrapyrrole used by siroheme-dependent sulfite and nitrite reductases (SiR/ NiRs) in catalyzing the six-electron reduction of sulfite to sulfide or nitrite to ammonia[1]. NiRs prepare sulfur and nitrogen for incorporation into biomolecules in organisms as diverse as proteobacteria and plants[2] This iron-containing prosthetic group is a precursor to heme or heme d1 in the alternative heme biosynthesis route used by some sulfate-reducing or denitrifying bacteria[3,4].

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