Abstract

Nitrate (NO3–) and auxin are key regulators of root growth and development, modulating the signalling cascades in auxin-induced lateral root formation. Auxin biosynthesis, transport, and transduction are significantly altered by nitrate. A decrease in nitrate (NO3–) supply tends to promote auxin translocation from shoots to roots and vice-versa. This nitrate mediated auxin biosynthesis regulating lateral roots growth is induced by the nitrate transporters and its downstream transcription factors. Most nitrate responsive genes (short-term and long-term) are involved in signalling overlap between nitrate and auxin, thereby inducing lateral roots initiation, emergence, and development. Moreover, in the auxin signalling pathway, the varying nitrate supply regulates lateral roots development by modulating the auxin accumulation in the roots. Here, we focus on the roles of nitrate responsive genes in mediating auxin biosynthesis in Arabidopsis root, and the mechanism involved in the transport of auxin at different nitrate levels. In addition, this review also provides an insight into the significance of nitrate responsive regulatory module and their downstream transcription factors in root system architecture in the model plant Arabidopsis thaliana.

Highlights

  • Roots are crucial for the anchorage of plants in the soil and facilitate the translocation of water and mineral nutrients

  • Several nitrate responsive genes involved in nitrate signalling promotes lateral root growth

  • These genes are characterized in terms of nitrate regulatory genes, which build up signalling overlap between nitrate and auxin, and subsequently induce lateral roots (LRs) initiation, emergence, and development [50]

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Summary

Introduction

Roots are crucial for the anchorage of plants in the soil and facilitate the translocation of water and mineral nutrients. IAA is the most researched and best naturally occurring active auxin [12], and it plays a specific role in the control of systemic inhibition of fresh lateral roots (LRs) developments in response to the sufficient supply of nitrate [16]. Both external NO3− and IAA supply significantly influence the auxin concentration in the tiller nodes [17]. We focus on an in-depth role of NO3− in auxin-induced signalling, and the relationship between NO3− and IAA transcript levels in the regulation of lateral root initiation, emergence, and development in the model plant Arabidopsis thaliana

Classification of Nitrate Responsive Genes
Short and Long Term Nitrate Response Genes
Long Term Nitrate Response Genes
Nitrate Responsive Genes Enhances Auxin Activity in the Roots
Nitrate Signalling Pathways and Auxin Response
Nitrate Uptake
Auxin Response Network
Auxin Translocation in Response to Nitrate Level
Influence of Auxin Concentration on Root Growth
TAA1 and TAR2 Regulatory Module
ANR1 and AXR4 Regulatory Module
CLV1 and CLE1 Regulatory Module
FIN219-JAR1 Regulatory Module
FIP1 and CPSF30-L Regulatory Module
TCP20-NLPs Regulatory Module
Nitrate-Responsive OBP4-XTH9 Regulatory Module
Conclusions and Future Perspective
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