Abstract

BackgroundIntermixing of genomes through meiotic reassortment and recombination of homologous chromosomes is a unifying theme of sexual reproduction in eukaryotic organisms and is considered crucial for their adaptive evolution. Previous studies of the budding yeast species Saccharomycodes ludwigii suggested that meiotic crossing over might be absent from its sexual life cycle, which is predominated by fertilization within the meiotic tetrad.ResultsWe demonstrate that recombination is extremely suppressed during meiosis in Sd. ludwigii. DNA double-strand break formation by the conserved transesterase Spo11, processing and repair involving interhomolog interactions are required for normal meiosis but do not lead to crossing over. Although the species has retained an intact meiotic gene repertoire, genetic and population analyses suggest the exceptionally rare occurrence of meiotic crossovers in its genome. A strong AT bias of spontaneous mutations and the absence of recombination are likely responsible for its unusually low genomic GC level.ConclusionsSd. ludwigii has followed a unique evolutionary trajectory that possibly derives fitness benefits from the combination of frequent mating between products of the same meiotic event with the extreme suppression of meiotic recombination. This life style ensures preservation of heterozygosity throughout its genome and may enable the species to adapt to its environment and survive with only minimal levels of rare meiotic recombination. We propose Sd. ludwigii as an excellent natural forum for the study of genome evolution and recombination rates.

Highlights

  • Intermixing of genomes through meiotic reassortment and recombination of homologous chromosomes is a unifying theme of sexual reproduction in eukaryotic organisms and is considered crucial for their adaptive evolution

  • The 12.5-Mb assembly consists of 7 chromosomal scaffolds, in concordance with pulsed-field gel electrophoresis (PFGE) karyotyping [12, 40] (Fig. 2a) and previous genetic mapping [11, 12]

  • Sd. ludwigii chromosomes exhibit GC levels that are unusually low for a yeast species (30.9% on average; Fig. 2a), as shown by a comparison to 100 yeast and other fungal genomes (Additional file 2: Fig. S2a; Additional file 3: Table S2)

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Summary

Introduction

Intermixing of genomes through meiotic reassortment and recombination of homologous chromosomes is a unifying theme of sexual reproduction in eukaryotic organisms and is considered crucial for their adaptive evolution. Thought to have arisen early in the eukaryotic evolution, is a ubiquitous attribute of sexual life cycles [2]. I), parental chromosomes are recombined and separated, while in the second division sister chromatids segregate (meiosis II). Reassortment and recombination of homologous chromosomes in meiosis I lead to novel genetic constellations in the offspring. These function as substrates for natural selection, which can promote advantageous and purge deleterious genetic combinations [3, 4]. The considerable biological costs of sex render its widespread occurrence paradoxical, and the questions of its evolutionary origin and functions are outstanding enigmas in biology [5,6,7]

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