Abstract
The assignment test is believed to have the potential to estimate the contemporary rate of immigration and is considered as an alternative to ecological methods (e.g., mark-recapture and radio/GPS tracking). However, the conventional assignment test provides different results from those of the mark-recapture method, when it is applied to populations with low genetic differentiation from one another. The difference derives from a difference in the definition of “immigrant”; immigrants in the mark-recapture method are individuals coming from outside a predefined population, whereas immigrants in the assignment test are individuals coming from other genetically differentiated populations. We propose a sampling design of the assignment test bridging a gap between the ecological and genetical definition of immigrant. The assignment test application based on this design identifies immigrants referring to the allele frequency of a focal population before dispersal occurs. We tested the efficiency of the proposed sampling design by comparing immigration rates estimated by the assignment test with those from mark-recapture records of a grey-sided vole (Myodes rufocanus) population, which was not significantly genetically differentiated from the surrounding populations. The proposed design provided 7–30% closer results to those from the mark-recapture in accuracy, in comparison with results from the conventional assignment test, and in the detection power 23–54% improvement was observed. The serial sampling for the assignment test could bridge the differences between ecological methods and the assignment test.
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