Abstract

Recognition of elements of protein tertiary structure is crucial for biotechnological and biomedical tasks; this makes the development of optical sensors for certain protein surface elements important. Herein, we demonstrated the ability of iron(II) clathrochelates (1–3) functionalized with mono-, di- and hexa-carboxyalkylsulfide to induce selective circular dichroism (CD) response upon binding to globular proteins. Thus, inherently CD-silent clathrochelates revealed selective inducing of CD spectra when binding to human serum albumin (HSA) (1, 2), beta-lactoglobuline (2) and bovine serum albumin (BSA) (3). Hence, functionalization of iron(II) clathrochelates with the carboxyalkylsulfide group appears to be a promising tool for the design of CD-probes sensitive to certain surface elements of proteins tertiary structure. Additionally, interaction of 1–3 with proteins was also studied by isothermal titration calorimetry, protein fluorescence quenching, electrospray ionization mass spectrometry (ESI-MS) and computer simulations. Formation of both 1:1 and 1:2 assemblies of HSA with 1–3 was evidenced by ESI-MS. A protein fluorescence quenching study suggests that 3 binds with both BSA and HSA via the sites close to Trp residues. Molecular docking calculations indicate that for both BSA and HSA, binding of 3 to Site I and to an “additional site” is more favorable energetically than binding to Site II.

Highlights

  • Proteins are the main working instruments of a living organism

  • We examined the induction of the circular dichroism (CD) signal caused by a supramolecular binding of the iron(II) clathrochelates with one, two or six flexible carboxyalkylsulfide substituent(s) to globular proteins, such as bovine serum albumin (BSA), human serum albumin (HSA), LYZ and BLG (Figure 2)

  • 1–3 induced in the presence of globular proteins bovine (BSA) and human (HSA) serum albumin, lysozyme (LYZ) and beta-lactoglobulin (BLG) in 0.05 M Tris–HCl buffer with pH 7.9

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Summary

Introduction

Proteins are the main working instruments of a living organism These macromolecules are precise tools for performing various biological functions, such as fermentative catalysis, transport and sensing [1,2]. Most proteins manifest these properties by using the unique tertiary structure of their polypeptide chains, forming the surface with specific location of amino acid residues, which are able to form hydrogen bonds, salt bridges or hydrophobic domains [2,3,4]. The development of convenient and reliable (preferably optical) molecular sensors/probes, which are able to bind selectively to the above surface elements, giving a specific and clear response on this supramolecular assembly, is highly required

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