Abstract

This paper describes our approach for the Chinese clinical named entity recognition (CNER) task organized by the 2020 China Conference on Knowledge Graph and Semantic Computing (CCKS) competition. In this task, we need to identify the entity boundary and category labels of six entities from Chinese electronic medical record (EMR). We constructed a hybrid system composed of a semi-supervised noisy label learning model based on adversarial training and a rule post-processing module. The core idea of the hybrid system is to reduce the impact of data noise by optimizing the model results. Besides, we used post-processing rules to correct three cases of redundant labeling, missing labeling, and wrong labeling in the model prediction results. Our method proposed in this paper achieved strict criteria of 0.9156 and relax criteria of 0.9660 on the final test set, ranking first.

Highlights

  • 1.1 Evaluation TaskThis task is a continuation of the series of evaluation carried out by China Conference on Knowledge Graph and Semantic Computing (CCKS) around the semantics of Chinese electronic medical records

  • This paper describes our approach for the Chinese clinical named entity recognition (CNER) task organized by the 2020 China Conference on Knowledge Graph and Semantic Computing (CCKS) competition

  • We constructed a hybrid system composed of a semi-supervised noisy label learning model based on adversarial training and a rule post-processing module

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Summary

Evaluation Task

This task is a continuation of the series of evaluation carried out by China Conference on Knowledge Graph and Semantic Computing (CCKS) around the semantics of Chinese electronic medical records. It has been extended and expanded on the basis of the relevant evaluation tasks of CCKS2017, CCKS2018, and CCKS2019. For a given set of plain text documents of electronic medical records (EMRs), this Chinese medical record MER task in 2020 is to extract entity mentions and classify them into six predefined types of entities: disease and diagnosis, imaging examination, laboratory examination, operation, drug, and anatomy

Data Set
Overview of Main Challenges and Solutions
Adversarial Training
Post-processing Rules
Sentence Segmentation
Text Normalization
Results
CONCLUSION AND FUTURE WORK
DATA AVAILABILITY STATEMENT
Full Text
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