Abstract

We give an extended review of recent numerical and analytical studies on semiflexible chains near surfaces undertaken at Institut Charles Sadron (sometimes in collaboration) with a focus on static properties. The statistical physics of thin confined layers, strict two-dimensional (2D) layers and adsorption layers (both at equilibrium with the dilute bath and from irreversible chemisorption) are discussed for the well-known worm-like-chain (WLC) model. There is mounting evidence that biofilaments (except stable d-DNA) are not fully described by the WLC model. A number of augmented models, like the (super) helical WLC model, the polymorphic model of microtubules (MT) and a model with (strongly) nonlinear flexural elasticity are presented, and some aspects of their surface behavior are analyzed. In many cases, we use approaches different from those in our previous work, give additional results and try to adopt a more general point of view with the hope to shed some light on this complex field.

Highlights

  • Polymers are large molecules comprising one or a few repeating chemical motives called monomers

  • The statistical physics of a single WLC is a classical topic of textbooks [1,2,3,7]

  • Local bending of a small section of length δs by an angle δθ is penalized by a bending energy cost δH = ( B/2)(δθ )2 /(δs) quadratic in δθ

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Summary

Introduction

Polymers are large molecules comprising one or a few repeating chemical motives called monomers. That in dense solutions, or in melts, the excluded volume is screened and the polymer configurations remain ideal. This encourages us to use mean-field theory to describe these systems. Polyelectrolytes are seen as polymers whose monomers interact via the 3D screened electrostatic Yukawa-like potential q2 lrB e−κ D r expressed in thermal units between charges q counted in elementary charges with l B the Bjerrum length (≈0.7 nm in water) and κ D the inverse Debye screening length. The electrostatic excluded volume associated with the second virial of the screened potential typically does not swell the stiff biofilaments, except for long d-DNA’s.

Single Chain Properties
Simulations of WLC Melts and Lattice Artifacts
Two-Dimensional Polymer Melts
Three-Dimensional Polymer Melts
Adsorption of WLC
Loop and Tail Partition Function
Reversible Adsorption of an Ideal WLC from Dilute Solution
Irreversible Chemisorption of a WLC from Dilute Solution
Filaments in 2D beyond WLC
The Helical Filament Squeezed in 2D
A Bit of Mechanics
Thermally-Injected Twist-Kinks and Hyper Flexibility
The Free Energy Map
Long Range Elasticity and Switchability
Bistability and Cooperativity
Polymorphic Model of Microtubules
Miscellaneous Topics and Outlook

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