Abstract

Random base-pairing interactions between messenger RNAs and noncoding RNAs can reduce translation efficiency.

Highlights

  • Related research article Umu SU, Poole AM, Dobson RCJ, Gardner PP. 2016

  • Translation is the process by which the genetic information in a molecule of messenger RNA produces a protein, and the rate at which protein is produced from a given mRNA molecule is called the translation efficiency

  • This number is different for different mRNA molecules (Maier et al, 2009; Guo et al, 2008), which is why researchers are trying to determine which features of these molecules affect their translation efficiency (Tuller et al, 2010; Ferreira et al, 2013; Kozak, 2005; Gingold and Pilpel, 2011)

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Summary

Introduction

Avoidance is the degree to which an mRNA molecule avoids random interactions with noncoding RNA molecules in the cell. The researchers show that the levels of noncoding RNAs in bacterial cells are two orders of magnitude greater than the levels of mRNAs. To estimate the probability of random basepairing interactions taking place between mRNAs and noncoding RNAs, consider a fivebase region in a single mRNA. Given the number of mRNAs and noncoding RNAs that are found in cells, random interactions between the two are inevitable.

Results
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