Abstract

We are still facing a Covid-19 pandemic these days and after the aggressively infection control measures taken by the governments in the whole world, there is a need of a rapid pharmaceutical solution in order to control this crisis. The computer aided chemistry and molecular docking is a rapid tool for drug screening and investigation. Moreover, more metal-based drugs are tested daily by research institutes for their antiviral activity. Here, we make use of theoretical studies on previously published biological active complex molecules of vanadium as an example of evaluating possible drug candidates before entering the laboratory. We used DFT calculation studies for structural elucidation and optimization of the molecules and molecular docking studies on several Covid-19 related proteins. Our findings suggest that drug discovery should always be computer -aided. Additionally, it is found that Vtocdea and VXn molecules are seem to be good candidates for further studies as antiviral agents.

Highlights

  • Nowadays the scientific community faces a unique situation due to the Covid–19 disease

  • After the Covid-19 pandemic and the aggressively infection control measures taken by the governments in the whole world, the need for a rapid pharmaceutical solution was more that necessary

  • The computer aided chemistry and molecular docking is a rapid tool to drug screening and investigation

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Summary

Introduction

Nowadays the scientific community faces a unique situation due to the Covid–19 disease. The World Health Organization (WHO), declared the coronavirus disease a global pandemic in March 2020 [1]. Covid–19 is a member of Betacoronoviruses, the former human coronaviruses SARS and MERS [2]. SARS-CoV–2 belongs to the +RNA virus family that utilize single-stranded positive-sense RNA molecules as genomes. SARS-CoV–2, a positive strand RNA virus encodes four structural proteins the matrix (M), small envelope (E), spike (S) and nucleocapsid phosphoprotein (N). Sixteen non-structural proteins (nsp1–16), the nucleocapsid phosphoprotein N which is essential for linking the viral genome to the viral membrane and its N-terminal RNA binding domain (N-NTD) that captures the RNA genome [3]

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