Abstract

We utilized fluorescence in situ hybridization (FISH) to screen for subtelomeric rearrangements in 82 Thai patients with unexplained intellectual disability (ID) and detected subtelomeric rearrangements in 5 patients. Here, we reported on a patient with der(20)t(X;20)(p22.3;q13.3) and a patient with der(3)t(X;3)(p22.3;p26.3). These rearrangements have never been described elsewhere. We also reported on a patient with der(10)t(7;10)(p22.3;q26.3), of which the same rearrangement had been reported in one literature. Well-recognized syndromes were detected in two separated patients, including 4p deletion syndrome and 1p36 deletion syndrome. All patients with subtelomeric rearrangements had both ID and multiple congenital anomalies (MCA) and/or dysmorphic features (DF), except the one with der(20)t(X;20), who had ID alone. By using FISH, the detection rate of subtelomeric rearrangements in patients with both ID and MCA/DF was 8.5%, compared to 2.9% of patients with only ID. Literature review found 28 studies on the detection of subtelomeric rearrangements by FISH in patients with ID. Combining data from these studies and our study, 15,591 patients were examined and 473 patients with subtelomeric rearrangements were determined. The frequency of subtelomeric rearrangements detected by FISH in patients with ID was 3%. Terminal deletions were found in 47.7%, while unbalanced derivative chromosomes were found in 47.9% of the rearrangements.

Highlights

  • An intellectual disability (ID) is a condition wherein the development of the mentality is arrested or incomplete, which contributes to the impairment of the overall level of intelligence, including cognitive, language, motor, and social abilities [1]

  • We found that frequency of subtelomeric rearrangements in patients with ID and MCA/DF was higher than that of those patients with ID alone (8.5% versus 2.9%)

  • The deletions can be detected by using standard karyotype analysis in 50–60% of patients with 4p deletion syndrome and 25% of patients with 1p36 deletion syndrome, while FISH and chromosomal microarray (CMA) can detect chromosomal rearrangements in over 95% of the patients [38, 39]

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Summary

Introduction

An intellectual disability (ID) is a condition wherein the development of the mentality is arrested or incomplete, which contributes to the impairment of the overall level of intelligence, including cognitive, language, motor, and social abilities [1]. Genetic factors are a significant cause of ID. More than half of all patients with ID are categorized as having an unexplained ID, with subtelomeric rearrangements having been observed in a number of these patients, ranging between 0 and 29.4% [2]. The subtelomere is a region between chromosomespecific sequences and telomeric caps of each chromosome. This region is located in close proximity to a gene-rich area. Due to sequence homology between subtelomeres of different chromosomes, it can facilitate recombination and may subsequently result in detrimental effects, that is, promoting disease-causing chromosomal rearrangements [3]

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